CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016511
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Serine/arginine-rich splicing factor 7 
Protein Synonyms/Alias
 Splicing factor, arginine/serine-rich 7 
Gene Name
 Srsf7 
Gene Synonyms/Alias
 Sfrs7 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
53NLGTGAGKGELERAFacetylation[1, 2, 3]
53NLGTGAGKGELERAFsuccinylation[3]
53NLGTGAGKGELERAFubiquitination[4]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [4] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Required for pre-mRNA splicing. Represses the splicing of MAPT/Tau exon 10 (By similarity). 
Sequence Annotation
 DOMAIN 40 113 RRM.
 REPEAT 182 189 1.
 REPEAT 190 197 2.
 REPEAT 198 205 3.
 REPEAT 206 213 4.
 REPEAT 240 247 5; approximate.
 REPEAT 248 255 6; approximate.
 ZN_FING 133 150 CCHC-type.
 REGION 182 255 6 X 8 AA repeats of R-R-S-R-S-X-S-X.
 MOD_RES 53 53 N6-acetyllysine (By similarity).
 MOD_RES 192 192 Phosphoserine.
 MOD_RES 194 194 Phosphoserine.
 MOD_RES 196 196 Phosphoserine.
 MOD_RES 208 208 Phosphoserine.
 MOD_RES 210 210 Phosphoserine.
 MOD_RES 212 212 Phosphoserine.
 MOD_RES 216 216 Phosphoserine.
 MOD_RES 221 221 Phosphoserine (By similarity).
 MOD_RES 223 223 Phosphoserine (By similarity).
 MOD_RES 225 225 Phosphoserine (By similarity).
 MOD_RES 252 252 Phosphoserine.
 MOD_RES 254 254 Phosphoserine.
 MOD_RES 256 256 Phosphoserine.
 MOD_RES 260 260 Phosphoserine (By similarity).
 MOD_RES 262 262 Phosphoserine (By similarity).  
Keyword
 Acetylation; Alternative splicing; Complete proteome; Metal-binding; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Repressor; RNA-binding; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 267 AA 
Protein Sequence
MRSSARGRPL QAATAFFLSL FFFLRRFERG FWLWGGDSET KVYVGNLGTG AGKGELERAF 60
SYYGPLRTVW IARNPPGFAF VEFEDPRDAE DAVRGLDGKV ICGSRVRVEL STGMPRRSRF 120
DRPPARRPFD PNDRCYECGE KGHYAYDCHR YSRRRRSRSR SRSHSRSRGR RYSRSRSRSR 180
GRRSRSASPR RSRSVSLRRS RSASLRRSRS GSIIGSRYFQ SRSRSRSRSR SISRPRSSRS 240
KSRSPSPKRS RSPSGSPHRS ASPERMD 267 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0048025; P:negative regulation of mRNA splicing, via spliceosome; ISS:UniProtKB.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom.
 IPR001878; Znf_CCHC. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM
 SM00343; ZnF_C2HC 
PROSITE
 PS50102; RRM
 PS50158; ZF_CCHC 
PRINTS