UniProt Accession

 M0R7B4_RAT; M0R7B4 

Genbank Protein ID

 AABR06091665; AABR06091666; AABR06091667; AABR06091668; AABR06091669; AABR06091670; AABR06091671; AABR06091672 

Genbank Nucleotide ID

  

Protein Name

 Protein Hist1h1d 

Protein Synonyms/Alias

  

Gene Name

 LOC684828 

Gene Synonyms/Alias

 Hist1h1d 

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
47	PVSELITKAVAASKE	acetylation	[1]
53	TKAVAASKERSGVSL	acetylation	[1]
65	VSLAALKKALAAAGY	ubiquitination	[2]
76	AAGYDVEKNNSRIKL	acetylation	[1]
76	AAGYDVEKNNSRIKL	ubiquitination	[2]
91	GLKSLVSKGILVQTK	acetylation	[1]

Reference

 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 

Functional Description

  

Sequence Annotation

  

Keyword

 Chromosome; Complete proteome; DNA-binding; Nucleus; Reference proteome. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 230 AA 

Protein Sequence

Gene Ontology

 GO:0000786; C:nucleosome; IEA:InterPro.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 

Interpro

 IPR005818; Histone_H1/H5.
 IPR005819; Histone_H5.
 IPR011991; WHTH_DNA-bd_dom. 

Pfam

 PF00538; Linker_histone 

SMART

 SM00526; H15 

PROSITE

 PS51504; H15 

PRINTS

 PR00624; HISTONEH5.