CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009392
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ubiquitin-fold modifier 1 
Protein Synonyms/Alias
  
Gene Name
 UFM1 
Gene Synonyms/Alias
 C13orf20; BM-002 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
19SDPRLPYKVLSVPESubiquitination[1, 2, 3]
69TAGNVFLKHGSELRIacetylation[4]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [4] Monoclonal antibody cocktail as an enrichment tool for acetylome analysis.
 Shaw PG, Chaerkady R, Zhang Z, Davidson NE, Pandey A.
 Anal Chem. 2011 May 15;83(10):3623-6. [PMID: 21466224
Functional Description
 Ubiquitin-like modifier protein which binds to a number of target proteins, such as DDRGK1. 
Sequence Annotation
 CROSSLNK 83 83 Glycyl lysine isopeptide (Gly-Lys)  
Keyword
 3D-structure; Alternative splicing; Complete proteome; Cytoplasm; Isopeptide bond; Nucleus; Reference proteome; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 85 AA 
Protein Sequence
MSKVSFKITL TSDPRLPYKV LSVPESTPFT AVLKFAAEEF KVPAATSAII TNDGIGINPA 60
QTAGNVFLKH GSELRIIPRD RVGSC 85 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0071569; P:protein ufmylation; IDA:UniProtKB. 
Interpro
 IPR005375; UFM1. 
Pfam
 PF03671; Ufm1 
SMART
  
PROSITE
  
PRINTS