CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000424
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit 
Protein Synonyms/Alias
 O-GlcNAc transferase subunit p110; O-linked N-acetylglucosamine transferase 110 kDa subunit; OGT 
Gene Name
 OGT 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
16ADSTEPTKRMLSFQGubiquitination[1, 2, 3, 4, 5, 6]
83HFSTLAIKQNPLLAEubiquitination[1, 2, 3, 4, 5, 7, 8]
100SNLGNVYKERGQLQEubiquitination[1, 2, 3, 4, 5, 7, 9]
168SDLGNLLKALGRLEEubiquitination[1, 2, 3, 4, 5, 7, 8, 9, 10]
236INLGNVLKEARIFDRubiquitination[7, 9]
306LANALKEKGSVAEAEubiquitination[4]
337LNNLANIKREQGNIEubiquitination[4]
352EAVRLYRKALEVFPEubiquitination[4]
385QEALMHYKEAIRISPubiquitination[2, 4]
440SNLASIHKDSGNIPEubiquitination[4]
488DYDERMKKLVSIVADubiquitination[4, 6]
499IVADQLEKNRLPSVHubiquitination[6]
550YEHPKDLKLSDGRLRubiquitination[4, 6]
604DGTNFRVKVMAEANHubiquitination[4]
623SQIPCNGKAADRIHQubiquitination[4, 6]
644VNMNGYTKGARNELFubiquitination[4]
716ANMFPHLKKKAVIDFubiquitination[1, 5, 7, 11, 12]
717NMFPHLKKKAVIDFKubiquitination[4]
718MFPHLKKKAVIDFKSubiquitination[4]
724KKAVIDFKSNGHIYDubiquitination[4]
742VLNGIDLKAFLDSLPubiquitination[4, 7, 9, 12]
752LDSLPDVKIVKMKCPubiquitination[4, 7]
866QMWANILKRVPNSVLubiquitination[4, 7]
908IFSPVAPKEEHVRRGubiquitination[4]
971GCLELIAKNRQEYEDubiquitination[4]
991GTDLEYLKKVRGKVWacetylation[6, 13]
991GTDLEYLKKVRGKVWubiquitination[2, 4]
992TDLEYLKKVRGKVWKubiquitination[4]
1010SSPLFNTKQYTMELEubiquitination[1, 2, 3, 4, 5, 6, 12]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [3] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [4] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [5] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [6] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [7] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [8] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931]
 [9] Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels.
 Lee KA, Hammerle LP, Andrews PS, Stokes MP, Mustelin T, Silva JC, Black RA, Doedens JR.
 J Biol Chem. 2011 Dec 2;286(48):41530-8. [PMID: 21987572]
 [10] Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level.
 Danielsen JM, Sylvestersen KB, Bekker-Jensen S, Szklarczyk D, Poulsen JW, Horn H, Jensen LJ, Mailand N, Nielsen ML.
 Mol Cell Proteomics. 2011 Mar;10(3):M110.003590. [PMID: 21139048]
 [11] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [12] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [13] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta- linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, PFKL, KMT2E/MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Involved in glycolysis regulation by mediating glycosylation of 6-phosphofructokinase PFKL, inhibiting its activity. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. Plays a key role in chromatin structure by mediating O- GlcNAcylation of 'Ser-112' of histone H2B: recruited to CpG-rich transcription start sites of active genes via its interaction with TET proteins (TET1, TET2 or TET3). As part of the NSL complex indirectly involved in acetylation of nucleosomal histone H4 on several lysine residues. 
Sequence Annotation
 REPEAT 21 54 TPR 1.
 REPEAT 89 122 TPR 2.
 REPEAT 123 156 TPR 3.
 REPEAT 157 190 TPR 4.
 REPEAT 191 224 TPR 5.
 REPEAT 225 258 TPR 6.
 REPEAT 259 292 TPR 7.
 REPEAT 293 326 TPR 8.
 REPEAT 327 360 TPR 9.
 REPEAT 361 394 TPR 10.
 REPEAT 395 428 TPR 11.
 REPEAT 429 462 TPR 12.
 REPEAT 463 473 TPR 13; truncated.
 NP_BIND 905 908 UDP.
 NP_BIND 911 914 UDP.
 NP_BIND 929 931 UDP.
 REGION 991 1010 Required for phosphatidylinositol 3,4,5-
 MOTIF 487 503 Nuclear localization signal (Potential).
 ACT_SITE 508 508 Proton acceptor (Probable).
 BINDING 849 849 UDP.
 BINDING 852 852 UDP.
 BINDING 935 935 UDP.
 MOD_RES 2 2 N-acetylalanine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Apoptosis; Cell membrane; Chromatin regulator; Complete proteome; Cytoplasm; Direct protein sequencing; Glycosyltransferase; Lipid-binding; Membrane; Mitochondrion; Nucleus; Polymorphism; Reference proteome; Repeat; TPR repeat; Transferase; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1046 AA 
Protein Sequence
MASSVGNVAD STEPTKRMLS FQGLAELAHR EYQAGDFEAA ERHCMQLWRQ EPDNTGVLLL 60
LSSIHFQCRR LDRSAHFSTL AIKQNPLLAE AYSNLGNVYK ERGQLQEAIE HYRHALRLKP 120
DFIDGYINLA AALVAAGDME GAVQAYVSAL QYNPDLYCVR SDLGNLLKAL GRLEEAKACY 180
LKAIETQPNF AVAWSNLGCV FNAQGEIWLA IHHFEKAVTL DPNFLDAYIN LGNVLKEARI 240
FDRAVAAYLR ALSLSPNHAV VHGNLACVYY EQGLIDLAID TYRRAIELQP HFPDAYCNLA 300
NALKEKGSVA EAEDCYNTAL RLCPTHADSL NNLANIKREQ GNIEEAVRLY RKALEVFPEF 360
AAAHSNLASV LQQQGKLQEA LMHYKEAIRI SPTFADAYSN MGNTLKEMQD VQGALQCYTR 420
AIQINPAFAD AHSNLASIHK DSGNIPEAIA SYRTALKLKP DFPDAYCNLA HCLQIVCDWT 480
DYDERMKKLV SIVADQLEKN RLPSVHPHHS MLYPLSHGFR KAIAERHGNL CLDKINVLHK 540
PPYEHPKDLK LSDGRLRVGY VSSDFGNHPT SHLMQSIPGM HNPDKFEVFC YALSPDDGTN 600
FRVKVMAEAN HFIDLSQIPC NGKAADRIHQ DGIHILVNMN GYTKGARNEL FALRPAPIQA 660
MWLGYPGTSG ALFMDYIITD QETSPAEVAE QYSEKLAYMP HTFFIGDHAN MFPHLKKKAV 720
IDFKSNGHIY DNRIVLNGID LKAFLDSLPD VKIVKMKCPD GGDNADSSNT ALNMPVIPMN 780
TIAEAVIEMI NRGQIQITIN GFSISNGLAT TQINNKAATG EEVPRTIIVT TRSQYGLPED 840
AIVYCNFNQL YKIDPSTLQM WANILKRVPN SVLWLLRFPA VGEPNIQQYA QNMGLPQNRI 900
IFSPVAPKEE HVRRGQLADV CLDTPLCNGH TTGMDVLWAG TPMVTMPGET LASRVAASQL 960
TCLGCLELIA KNRQEYEDIA VKLGTDLEYL KKVRGKVWKQ RISSPLFNTK QYTMELERLY 1020
LQMWEHYAAG NKPDHMIKPV EVTESA 1046 
Gene Ontology
 GO:0005813; C:centrosome; IDA:HPA.
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0000123; C:histone acetyltransferase complex; IDA:UniProtKB.
 GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
 GO:0070688; C:MLL5-L complex; IDA:UniProtKB.
 GO:0005886; C:plasma membrane; IDA:UniProtKB.
 GO:0008047; F:enzyme activator activity; IDA:BHF-UCL.
 GO:0005547; F:phosphatidylinositol-3,4,5-trisphosphate binding; IDA:UniProtKB.
 GO:0016262; F:protein N-acetylglucosaminyltransferase activity; IDA:UniProtKB.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0071300; P:cellular response to retinoic acid; IMP:BHF-UCL.
 GO:0080182; P:histone H3-K4 trimethylation; IMP:UniProtKB.
 GO:0043984; P:histone H4-K16 acetylation; IDA:UniProtKB.
 GO:0043981; P:histone H4-K5 acetylation; IDA:UniProtKB.
 GO:0043982; P:histone H4-K8 acetylation; IDA:UniProtKB.
 GO:0006917; P:induction of apoptosis; IDA:UniProtKB.
 GO:0048015; P:phosphatidylinositol-mediated signaling; IDA:UniProtKB.
 GO:0030854; P:positive regulation of granulocyte differentiation; IMP:BHF-UCL.
 GO:0051571; P:positive regulation of histone H3-K4 methylation; IDA:BHF-UCL.
 GO:0045862; P:positive regulation of proteolysis; IDA:UniProtKB.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
 GO:0006493; P:protein O-linked glycosylation; IDA:UniProtKB.
 GO:0006110; P:regulation of glycolysis; IDA:UniProtKB.
 GO:0046626; P:regulation of insulin receptor signaling pathway; IDA:UniProtKB.
 GO:0035020; P:regulation of Rac protein signal transduction; IDA:UniProtKB.
 GO:0032868; P:response to insulin stimulus; IDA:UniProtKB.
 GO:0007584; P:response to nutrient; TAS:ProtInc. 
Interpro
 IPR001440; TPR-1.
 IPR013026; TPR-contain_dom.
 IPR011990; TPR-like_helical.
 IPR019734; TPR_repeat. 
Pfam
 PF00515; TPR_1 
SMART
 SM00028; TPR 
PROSITE
 PS50005; TPR
 PS50293; TPR_REGION 
PRINTS