CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034981
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 PHD finger protein 3 (Predicted) 
Protein Synonyms/Alias
 Protein Phf3 
Gene Name
 Phf3 
Gene Synonyms/Alias
 Phf3_predicted; rCG_22398 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
163STKKPSGKTFSTSKAacetylation[1]
476TKSVTHSKPSMTIETacetylation[1]
491PRKTVAVKPEVGHSKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 2020 AA 
Protein Sequence
MDIVDTFNHL IPTEHLDDAL FLGSNLENEV CEDFSTSQNV LEDSLKNMLS DKDPMLGSAS 60
NQFCLPVLDS NDPNFQMPCT TVVGLDDIMD EGVVKESGND TIDEEELILP NRSLRDRVED 120
NSVRSPRKSP RLMAQEQVRS LRQSTIAKRS NAAPLSTKKP SGKTFSTSKA GVKPPERCQG 180
KEEVYASLKS EHPKESRRNS RHAEHMDMVL EVSASSADSP VPSCVGMKEA AELHPRHACN 240
NQGEVSAPSP DLSCSPPSEA SASAGVGGKR TEALMECKTS SSPLFKVSVK EDEQSDLVSG 300
ELDDTIEGVN AVGRLEQESE EIKFSCEGDR MSTEPESSDV SSDSACTDKN KTEKNEGAQC 360
HLELKNTVDI VDKPENSPPS NQMEMLDYGE DVGTNDAQLQ STEFTKSHLE EVDTCAFEPE 420
TSTFENTICD VPDQNSKQLN ITQSIKMETS NLQDDRSGLG PKNMKSKHTK SVTHSKPSMT 480
IETPRKTVAV KPEVGHSKTK SNAKTMKRNA DEPEPQPDCQ RPVKVRKKQV DKDLKSQSCN 540
SGVKSVKGQV HSVLKKIPQD QTAMQISKPL THSVNDKLPG HSGHSLEKPP HPGHTGHLVH 600
SNQKQSHKPQ PQAGAVRVTS HVRDEHEHPG TEHPKEEDKL KPKKLDRNLQ PRQRRSSRSF 660
SLDEPPLFIP DNIATVKKEG SDQTTSVENK YMWTPSKQCG FCKKPHGNRF MVGCGRCDDW 720
FHGDCVGLSL SQAQQMGEED KEYVCIRCCA EEDKKTDILD TETLETQASL EAHSEDKRVE 780
CGKLTSSSSK HSVTEDKHRH MDDPGRHKVK IVKRDSGEGK TSSDSRDNEI KKWQLAPLRK 840
LGQPLLPRRS SEEKSEKIAK DSAALTCAGE KAARSGTHEK QETKKKKVEK GGPNVHPPAA 900
AAIKPSADQI RQSVRHSLKD ILMKRLTDSN LKIPEEKSAK VATKIEKELF SFFRDTDAKY 960
KNKYRSLMFN LKDPKNNILF KKVLKGEVTP DHLIRMSPEE LASKELAAWR RRENRHTIEM 1020
IEKEQREVER RPITKITHKG EIEIESDAPM KEQEAAMEIQ EPSSANKSSE KPEASEKQKE 1080
ELDSTSKDTT SQHRQHLFDL NCKICIGRMA PPVDDLSPKT VKVVVGGARK HSDNEAESIA 1140
DALSSTTNIL ASEFFEEEKQ ESPKSTFSPT PRPEMPGTVE VESTFLARLN FIWKGFINMP 1200
SVAKFVTKAY PVSGSPEYLT EDLPDSIQVG GRISPQTVWD YVEKIKASGT KEICVVRFTP 1260
VTEEDQISYT LLFAYFSSRK RYGVAANNMK QVKDMYLIPL GAADKIPHPL VPFDGPGLEL 1320
HRPNLLLGLI IRQKLKRQHS ASAGPSHTAE TPESAPISLP PDKKGKMESS TEEAAEEESD 1380
FFNSFTTVLH KQRNKPPQPP QEDLPTAAEP LMEVTKQEPP KPLRFLPGVL IGWENQPSTL 1440
ELANKPLPVD DILQSLLGTT GQVYEQAQPV VEQSTLKEIP FINDQTTPKV EKIDKVEVTE 1500
GEAKEIKVKA ENVSESTGKN SGVEETSLVG SSSISPGPLA SLSLRGKPPD VSTEAFLTNL 1560
SIPSKQEETV ENKERTLKRP LLQDQENSSQ DNRTCSNSPC RPSTGKGSVD GNVSCSENLV 1620
ANTRSPQFIN LKRDPRQAAG RSQQTVSDSK DGESCRNGER HSVCAPSYNR EPVEPVSGEG 1680
KPSSLEKSSC VEQSDDSEAV PNSSSVENSN SSQAEQANPL QEDILTQNIE TIHPFRRGSA 1740
TSSSHFEGGN TCQSEFPSKS INFTPRSTSP RASTNFSPMR PQQPNLQHLK SSPPGFPFPG 1800
PQNFPPQSVF GFPPHLPPPL LPPPGFGFPQ NPPMAPWPPV HVPGQPQRMM GPLSQASRYM 1860
GPQNFYQVKD IRRPERRHSD PWGRQDQQQP DRPFNRGKGD RQRFYSDSHH LKRDRHDKEW 1920
EQESERHRHR DRSQEKDRDR KSKEEAHKDK ERPRLSHSDR AADGKANRES KSADKKPDRP 1980
KGEDHEKEKE REKSKHREGE KDRERYHKDR DHTDRAKSKR 2020 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR012921; SPOC_C.
 IPR003618; TFIIS_cen_dom.
 IPR017890; TFS2M.
 IPR019786; Zinc_finger_PHD-type_CS.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF00628; PHD
 PF07744; SPOC
 PF07500; TFIIS_M 
SMART
 SM00249; PHD
 SM00510; TFS2M 
PROSITE
 PS51321; TFIIS_CENTRAL
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2 
PRINTS