CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013894
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 1-deoxy-D-xylulose-5-phosphate synthase 
Protein Synonyms/Alias
 1-deoxyxylulose-5-phosphate synthase; DXP synthase; DXPS 
Gene Name
 dxs 
Gene Synonyms/Alias
 TTHA0006 
Created Date
 July 27, 2013 
Organism
 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 
NCBI Taxa ID
 300852 
Lysine Modification
Position
Peptide
Type
References
202KWVQDAEKLGKNILEacetylation[1]
Reference
 [1] Acetylome with structural mapping reveals the significance of lysine acetylation in Thermus thermophilus.
 Okanishi H, Kim K, Masui R, Kuramitsu S.
 J Proteome Res. 2013 Aug 1;. [PMID: 23901841
Functional Description
 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (By similarity). 
Sequence Annotation
 REGION 113 115 Thiamine pyrophosphate binding (By
 REGION 145 146 Thiamine pyrophosphate binding (By
 METAL 144 144 Magnesium (By similarity).
 METAL 173 173 Magnesium (By similarity).
 BINDING 72 72 Thiamine pyrophosphate (By similarity).
 BINDING 173 173 Thiamine pyrophosphate (By similarity).
 BINDING 281 281 Thiamine pyrophosphate (By similarity).
 BINDING 360 360 Thiamine pyrophosphate (By similarity).  
Keyword
 Complete proteome; Isoprene biosynthesis; Magnesium; Metal-binding; Reference proteome; Thiamine biosynthesis; Thiamine pyrophosphate; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 615 AA 
Protein Sequence
MILDKVNSPE DLKRLSLEEL LLLAEEIRSE IIRVTAQNGG HLASSLGAVE LVLALHRVFD 60
SPRDRILFDV GHQAYAHKLV TGRKDRFHTL RKEGGISGFT KVSESPHDAI TAGHASTSLA 120
NALGMVLARD LMGEDYHVVA VIGDGALTGG MALAALNKIG ELQKRMLIVL NDNEMSISEN 180
VGALNKYFKE LQIRKWVQDA EKLGKNILER ISPQLFGLVD RAKEAAKFLL HQENPFYAWG 240
IRYVGPVDGH DLKGLVHILE HLKALDGPTL LHVVTKKGKG YKVAEADPIY WHGPPGFDPK 300
KPEKVSKGYT WSQAFGDAVT ELAHMEPRLF VLTPAMREGS GLVRYSLEHP ERYLDVGICE 360
DVAVTTAAGL ALRGMKPIVA IYSTFLQRAY DQVIHDVAIE NLPVVFAIDR AGIVGADGAT 420
HHGVFDIAYL RTVPNLQIAA PKDALELRAM LKKALEVGGP VAIRYPRDNV ERAPEGVWPE 480
IAWGKWEVLK EGTEAYILAF GKTLRYALEA AGDDPRVGVV NARFLKPLDR EMLRELSRYK 540
LLTVEDHQKM GGFGSAVLEA LNEMGLKPEV QILGLPDRFF EHGAIPSLHR QAGIDAEGIR 600
KALAAMGVAL VHERA 615 
Gene Ontology
 GO:0008661; F:1-deoxy-D-xylulose-5-phosphate synthase activity; IEA:HAMAP.
 GO:0000287; F:magnesium ion binding; IEA:HAMAP.
 GO:0030976; F:thiamine pyrophosphate binding; IEA:HAMAP.
 GO:0052865; P:1-deoxy-D-xylulose 5-phosphate biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0016114; P:terpenoid biosynthetic process; IEA:HAMAP.
 GO:0009228; P:thiamine biosynthetic process; IEA:HAMAP. 
Interpro
 IPR005477; Dxylulose-5-P_synthase.
 IPR009014; Transketo_C/Pyr-ferredox_oxred.
 IPR015941; Transketolase-like_C.
 IPR005475; Transketolase-like_Pyr-bd.
 IPR020826; Transketolase_BS.
 IPR005476; Transketolase_C. 
Pfam
 PF13292; DXP_synthase_N
 PF02779; Transket_pyr
 PF02780; Transketolase_C 
SMART
 SM00861; Transket_pyr 
PROSITE
 PS00801; TRANSKETOLASE_1
 PS00802; TRANSKETOLASE_2 
PRINTS