CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008466
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 
Protein Synonyms/Alias
  
Gene Name
 yggW 
Gene Synonyms/Alias
 b2955; JW2922 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
307RDVEATDKPFEFFMNacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618] 
Functional Description
  
Sequence Annotation
 REGION 67 68 S-adenosyl-L-methionine 2 binding (By
 METAL 16 16 Iron-sulfur (4Fe-4S-S-AdoMet)
 METAL 20 20 Iron-sulfur (4Fe-4S-S-AdoMet)
 METAL 23 23 Iron-sulfur (4Fe-4S-S-AdoMet)
 BINDING 10 10 S-adenosyl-L-methionine 1 (By
 BINDING 22 22 S-adenosyl-L-methionine 2; via carbonyl
 BINDING 66 66 S-adenosyl-L-methionine 1; via amide
 BINDING 99 99 S-adenosyl-L-methionine 1 (By
 BINDING 126 126 S-adenosyl-L-methionine 2 (By
 BINDING 138 138 S-adenosyl-L-methionine 2 (By
 BINDING 163 163 S-adenosyl-L-methionine 2 (By  
Keyword
 4Fe-4S; Complete proteome; Iron; Iron-sulfur; Metal-binding; Oxidoreductase; Porphyrin biosynthesis; Reference proteome; S-adenosyl-L-methionine. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 378 AA 
Protein Sequence
MVKLPPLSLY IHIPWCVQKC PYCDFNSHAL KGEVPHDDYV QHLLNDLDND VAYAQGREVK 60
TIFIGGGTPS LLSGPAMQTL LDGVRARLPL AADAEITMEA NPGTVEADRF VDYQRAGVNR 120
ISIGVQSFSE EKLKRLGRIH GPQEAKRAAK LASGLGLRSF NLDLMHGLPD QSLEEALGDL 180
RQAIELNPPH LSWYQLTIEP NTLFGSRPPV LPDDDALWDI FEQGHQLLTA AGYQQYETSA 240
YAKPGYQCQH NLNYWRFGDY IGIGCGAHGK VTFPDGRILR TTKTRHPRGF MQGRYLESQR 300
DVEATDKPFE FFMNRFRLLE AAPRVEFIAY TGLCEDVIRP QLDEAIAQGY LTECADYWQI 360
TEHGKLFLNS LLELFLAE 378 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:InterPro.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0004109; F:coproporphyrinogen oxidase activity; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW. 
Interpro
 IPR004559; Coprogen_oxidase_HemN-rel.
 IPR006638; Elp3/MiaB/NifB.
 IPR010723; HemN_C_dom.
 IPR007197; rSAM.
 IPR023404; rSAM_horseshoe. 
Pfam
 PF06969; HemN_C
 PF04055; Radical_SAM 
SMART
 SM00729; Elp3 
PROSITE
  
PRINTS