CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024452
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Mitochondrial intermediate peptidase 
Protein Synonyms/Alias
 MIP 
Gene Name
 Mipep 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
124ADLADFVKIGHPDPAacetylation[1, 2]
168QRLLGDKKLMESLDAacetylation[3]
Reference
 [1] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [2] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [3] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Cleaves proteins, imported into the mitochondrion, to their mature size (By similarity). 
Sequence Annotation
 ACT_SITE 494 494 By similarity.
 METAL 493 493 Zinc; catalytic (By similarity).
 METAL 497 497 Zinc; catalytic (By similarity).
 METAL 500 500 Zinc; catalytic (By similarity).
 MOD_RES 124 124 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Calcium; Cobalt; Complete proteome; Hydrolase; Iron; Magnesium; Manganese; Metal-binding; Metalloprotease; Mitochondrion; Protease; Reference proteome; Transit peptide; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 711 AA 
Protein Sequence
MLLAAGARYA RRLCGRGAAA ALQGRTGRSC ARDVSTSWSP VGAAFNVKPQ SHLWNLLGER 60
RGLFGVPELS TPEGFQVAQE EALKKTEWLV ERACSTPPGP QTVLIFDELS DCLCRVADLA 120
DFVKIGHPDP AFREAAQEAC RSIGTMVEKL NTNVELYQSL QRLLGDKKLM ESLDAETRRV 180
AELFMFDFEI SGIHLDEEKR RRAVDLNVKI LDLSNAFLMR TNFPNKIRKS LLPEHIQHHF 240
ARDGSHLIID GLHAEASDDL VREAAYKIFL YPNADQLKCL EELLSSRDLL AKLVGYSTFS 300
HRALQGTIAQ TPETVMQFLE KLSEKLSERT RKDFKMMQGM KTKLNPQNSK LMPWDPPYYS 360
GVIRAERYNI EPSLYCPFLS LGACMEGLNV LFNKLLGITL YAEQTFKGEV WCNDIRKLAV 420
VHESEGLLGY IYCDFFQRAN KPQQDCHFTI RGGRLKEDGS YQLPVVVLML NLPHASRDFP 480
TLLTPGMMEN LFHEMGHAMH SMLGRTRYQH VTGTRCPTDF AEVPSILMEY FSNDYRVVSQ 540
FAKHYQTGQP LPKAMVSRLC ESKKVCTAAE MQLQVFYAAL DQIYHGQHPL KKSTTDILME 600
TQEQFYGLPY VPDTAWQLRF SHLVGYGAKY YSYLMSRAVA SMIWKECFLQ DPFNRAAGER 660
YRREMLAHGG GKEPMLMIQG MLQKCPSIDD FVDALVSDMN LDFETFFLDS K 711 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
 GO:0006508; P:proteolysis; IEA:UniProtKB-KW. 
Interpro
 IPR024079; MetalloPept_cat_dom.
 IPR024077; Neurolysin/TOP_dom2.
 IPR024080; Neurolysin/TOP_N.
 IPR001567; Pept_M3A_M3B. 
Pfam
 PF01432; Peptidase_M3 
SMART
  
PROSITE
 PS00142; ZINC_PROTEASE 
PRINTS