CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026971
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Radical SAM domain protein 
Protein Synonyms/Alias
  
Gene Name
 DVU_0182 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIM 
NCBI Taxa ID
 882 
Lysine Modification
Position
Peptide
Type
References
213KERDIVFKVHAMDNRmethylation[1]
Reference
 [1] Post-translational modifications of Desulfovibrio vulgaris Hildenborough sulfate reduction pathway proteins.
 Gaucher SP, Redding AM, Mukhopadhyay A, Keasling JD, Singh AK.
 J Proteome Res. 2008 Jun;7(6):2320-31. [PMID: 18416566
Functional Description
  
Sequence Annotation
  
Keyword
 4Fe-4S; Complete proteome; Iron; Iron-sulfur; Metal-binding; Reference proteome; S-adenosyl-L-methionine. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 307 AA 
Protein Sequence
MARYYMPAEG DSYLKKVWTW ATTGKRFRPS FPRTIEFQTL STCNAKCIFC PHKHSPKDIP 60
HGRMDDALFR KIVDECARHF VGRVSPYLTN EPLMDKRMPE MLRYIHDKMP FFTKSKINTN 120
AALLTEETGE ALIRAGLTHL WISVNGYSPE TYRTSMDLDL DRTLTNIDTF LATKRRLGAK 180
NPKVIVTTVE TNIVKPELDY ARKYWKERDI VFKVHAMDNR AGADSLTFKA SKPKLKRNCD 240
LFLKQAYIVE NGDMIICCHD WKQTVKVGNV AETSIKEVWN SRYFTDLIRD YVRGDYSRLG 300
ICAKCSS 307 
Gene Ontology
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0003824; F:catalytic activity; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0008152; P:metabolic process; IEA:GOC. 
Interpro
 IPR023885; 4Fe4S-binding_SPASM_dom.
 IPR013785; Aldolase_TIM.
 IPR007197; rSAM. 
Pfam
 PF13186; DUF4008
 PF04055; Radical_SAM 
SMART
  
PROSITE
  
PRINTS