CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023210
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ALK tyrosine kinase receptor 
Protein Synonyms/Alias
 Anaplastic lymphoma kinase; CD246 
Gene Name
 ALK 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
831ATYVFKMKDGVPVPLubiquitination[1]
1498KVHGSRNKPTSLWNPubiquitination[1]
1514YGSWFTEKPTKKNNPubiquitination[1]
1517WFTEKPTKKNNPIAKubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Neuronal orphan receptor tyrosine kinase that is essentially and transiently expressed in specific regions of the central and peripheral nervous systems and plays an important role in the genesis and differentiation of the nervous system. Transduces signals from ligands at the cell surface, through specific activation of the mitogen-activated protein kinase (MAPK) pathway. Phosphorylates almost exclusively at the first tyrosine of the Y-x-x-x-Y-Y motif. Following activation by ligand, ALK induces tyrosine phosphorylation of CBL, FRS2, IRS1 and SHC1, as well as of the MAP kinases MAPK1/ERK2 and MAPK3/ERK1. Acts as a receptor for ligands pleiotrophin (PTN), a secreted growth factor, and midkine (MDK), a PTN-related factor, thus participating in PTN and MDK signal transduction. PTN-binding induces MAPK pathway activation, which is important for the anti-apoptotic signaling of PTN and regulation of cell proliferation. MDK-binding induces phosphorylation of the ALK target insulin receptor substrate (IRS1), activates mitogen-activated protein kinases (MAPKs) and PI3-kinase, resulting also in cell proliferation induction. Drives NF-kappa-B activation, probably through IRS1 and the activation of the AKT serine/threonine kinase. Recruitment of IRS1 to activated ALK and the activation of NF-kappa-B are essential for the autocrine growth and survival signaling of MDK. 
Sequence Annotation
 DOMAIN 264 427 MAM 1.
 DOMAIN 437 473 LDL-receptor class A.
 DOMAIN 478 636 MAM 2.
 DOMAIN 1116 1392 Protein kinase.
 NP_BIND 1197 1199 ATP.
 REGION 1197 1199 Inhibitor binding.
 ACT_SITE 1249 1249 Proton acceptor (By similarity).
 BINDING 1124 1124 ATP; via carbonyl oxygen.
 BINDING 1150 1150 ATP (By similarity).
 BINDING 1150 1150 Inhibitor.
 BINDING 1199 1199 Inhibitor; via amide nitrogen.
 BINDING 1203 1203 Inhibitor.
 BINDING 1210 1210 Inhibitor.
 BINDING 1270 1270 ATP.
 MOD_RES 211 211 Phosphoserine.
 MOD_RES 1078 1078 Phosphotyrosine.
 MOD_RES 1092 1092 Phosphotyrosine.
 MOD_RES 1096 1096 Phosphotyrosine.
 MOD_RES 1131 1131 Phosphotyrosine.
 MOD_RES 1278 1278 Phosphotyrosine.
 MOD_RES 1282 1282 Phosphotyrosine; by autocatalysis.
 MOD_RES 1283 1283 Phosphotyrosine.
 MOD_RES 1359 1359 Phosphotyrosine.
 MOD_RES 1507 1507 Phosphotyrosine.
 MOD_RES 1584 1584 Phosphotyrosine.
 MOD_RES 1604 1604 Phosphotyrosine.
 CARBOHYD 169 169 N-linked (GlcNAc...) (Potential).
 CARBOHYD 244 244 N-linked (GlcNAc...) (Potential).
 CARBOHYD 285 285 N-linked (GlcNAc...) (Potential).
 CARBOHYD 324 324 N-linked (GlcNAc...) (Potential).
 CARBOHYD 411 411 N-linked (GlcNAc...) (Potential).
 CARBOHYD 424 424 N-linked (GlcNAc...) (Potential).
 CARBOHYD 445 445 N-linked (GlcNAc...) (Potential).
 CARBOHYD 563 563 N-linked (GlcNAc...) (Potential).
 CARBOHYD 571 571 N-linked (GlcNAc...) (Potential).
 CARBOHYD 627 627 N-linked (GlcNAc...) (Potential).
 CARBOHYD 709 709 N-linked (GlcNAc...) (Potential).
 CARBOHYD 808 808 N-linked (GlcNAc...) (Potential).
 CARBOHYD 863 863 N-linked (GlcNAc...) (Potential).
 CARBOHYD 864 864 N-linked (GlcNAc...) (Potential).
 CARBOHYD 886 886 N-linked (GlcNAc...) (Potential).
 CARBOHYD 986 986 N-linked (GlcNAc...) (Potential).  
Keyword
 3D-structure; ATP-binding; Cell membrane; Chromosomal rearrangement; Complete proteome; Disease mutation; Glycoprotein; Kinase; Membrane; Nucleotide-binding; Phosphoprotein; Polymorphism; Proto-oncogene; Receptor; Reference proteome; Repeat; Signal; Transferase; Transmembrane; Transmembrane helix; Tyrosine-protein kinase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1620 AA 
Protein Sequence
MGAIGLLWLL PLLLSTAAVG SGMGTGQRAG SPAAGPPLQP REPLSYSRLQ RKSLAVDFVV 60
PSLFRVYARD LLLPPSSSEL KAGRPEARGS LALDCAPLLR LLGPAPGVSW TAGSPAPAEA 120
RTLSRVLKGG SVRKLRRAKQ LVLELGEEAI LEGCVGPPGE AAVGLLQFNL SELFSWWIRQ 180
GEGRLRIRLM PEKKASEVGR EGRLSAAIRA SQPRLLFQIF GTGHSSLESP TNMPSPSPDY 240
FTWNLTWIMK DSFPFLSHRS RYGLECSFDF PCELEYSPPL HDLRNQSWSW RRIPSEEASQ 300
MDLLDGPGAE RSKEMPRGSF LLLNTSADSK HTILSPWMRS SSEHCTLAVS VHRHLQPSGR 360
YIAQLLPHNE AAREILLMPT PGKHGWTVLQ GRIGRPDNPF RVALEYISSG NRSLSAVDFF 420
ALKNCSEGTS PGSKMALQSS FTCWNGTVLQ LGQACDFHQD CAQGEDESQM CRKLPVGFYC 480
NFEDGFCGWT QGTLSPHTPQ WQVRTLKDAR FQDHQDHALL LSTTDVPASE SATVTSATFP 540
APIKSSPCEL RMSWLIRGVL RGNVSLVLVE NKTGKEQGRM VWHVAAYEGL SLWQWMVLPL 600
LDVSDRFWLQ MVAWWGQGSR AIVAFDNISI SLDCYLTISG EDKILQNTAP KSRNLFERNP 660
NKELKPGENS PRQTPIFDPT VHWLFTTCGA SGPHGPTQAQ CNNAYQNSNL SVEVGSEGPL 720
KGIQIWKVPA TDTYSISGYG AAGGKGGKNT MMRSHGVSVL GIFNLEKDDM LYILVGQQGE 780
DACPSTNQLI QKVCIGENNV IEEEIRVNRS VHEWAGGGGG GGGATYVFKM KDGVPVPLII 840
AAGGGGRAYG AKTDTFHPER LENNSSVLGL NGNSGAAGGG GGWNDNTSLL WAGKSLQEGA 900
TGGHSCPQAM KKWGWETRGG FGGGGGGCSS GGGGGGYIGG NAASNNDPEM DGEDGVSFIS 960
PLGILYTPAL KVMEGHGEVN IKHYLNCSHC EVDECHMDPE SHKVICFCDH GTVLAEDGVS 1020
CIVSPTPEPH LPLSLILSVV TSALVAALVL AFSGIMIVYR RKHQELQAMQ MELQSPEYKL 1080
SKLRTSTIMT DYNPNYCFAG KTSSISDLKE VPRKNITLIR GLGHGAFGEV YEGQVSGMPN 1140
DPSPLQVAVK TLPEVCSEQD ELDFLMEALI ISKFNHQNIV RCIGVSLQSL PRFILLELMA 1200
GGDLKSFLRE TRPRPSQPSS LAMLDLLHVA RDIACGCQYL EENHFIHRDI AARNCLLTCP 1260
GPGRVAKIGD FGMARDIYRA SYYRKGGCAM LPVKWMPPEA FMEGIFTSKT DTWSFGVLLW 1320
EIFSLGYMPY PSKSNQEVLE FVTSGGRMDP PKNCPGPVYR IMTQCWQHQP EDRPNFAIIL 1380
ERIEYCTQDP DVINTALPIE YGPLVEEEEK VPVRPKDPEG VPPLLVSQQA KREEERSPAA 1440
PPPLPTTSSG KAAKKPTAAE ISVRVPRGPA VEGGHVNMAF SQSNPPSELH KVHGSRNKPT 1500
SLWNPTYGSW FTEKPTKKNN PIAKKEPHDR GNLGLEGSCT VPPNVATGRL PGASLLLEPS 1560
SLTANMKEVP LFRLRHFPCG NVNYGYQQQG LPLEAATAPG AGHYEDTILK SKNSMNQPGP 1620 
Gene Ontology
 GO:0005887; C:integral to plasma membrane; IDA:UniProtKB.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0004704; F:NF-kappaB-inducing kinase activity; TAS:UniProtKB.
 GO:0004714; F:transmembrane receptor protein tyrosine kinase activity; IDA:UniProtKB.
 GO:0000187; P:activation of MAPK activity; TAS:UniProtKB.
 GO:0008283; P:cell proliferation; TAS:UniProtKB.
 GO:0048666; P:neuron development; TAS:UniProtKB.
 GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; TAS:UniProtKB.
 GO:0046777; P:protein autophosphorylation; IDA:UniProtKB.
 GO:0042981; P:regulation of apoptotic process; TAS:UniProtKB.
 GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; IEA:InterPro. 
Interpro
 IPR026830; ALK.
 IPR008985; ConA-like_lec_gl_sf.
 IPR011009; Kinase-like_dom.
 IPR002172; LDrepeatLR_classA_rpt.
 IPR000998; MAM_dom.
 IPR000719; Prot_kinase_cat_dom.
 IPR017441; Protein_kinase_ATP_BS.
 IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
 IPR008266; Tyr_kinase_AS.
 IPR020635; Tyr_kinase_cat_dom.
 IPR002011; Tyr_kinase_rcpt_2_CS. 
Pfam
 PF00629; MAM
 PF07714; Pkinase_Tyr 
SMART
 SM00192; LDLa
 SM00219; TyrKc 
PROSITE
 PS01209; LDLRA_1
 PS50068; LDLRA_2
 PS00740; MAM_1
 PS50060; MAM_2
 PS00107; PROTEIN_KINASE_ATP
 PS50011; PROTEIN_KINASE_DOM
 PS00109; PROTEIN_KINASE_TYR
 PS00239; RECEPTOR_TYR_KIN_II 
PRINTS
 PR00109; TYRKINASE.