CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035606
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein RGD1561333 
Protein Synonyms/Alias
  
Gene Name
 RGD1561333 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
42AERHGYIKGIVKDIIacetylation[1]
46GYIKGIVKDIIHDPGacetylation[1]
144ISHNPETKKTRVKLPacetylation[1]
177AGGGRIDKPILKAGRacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 257 AA 
Protein Sequence
MGRVIRDQRK GAGSVFRAHL KHRKGAARLR AVDFAERHGY IKGIVKDIIH DPGRSAPLAK 60
VVFRDPYRFK KRTELFIAAE GIHTGQFVYC GKKAQLNIGN VLPVGTMPEG TIVCCLEEKP 120
GDRGKLARAS GNYATVISHN PETKKTRVKL PSGSKKVISS ANRAVVGVVA GGGRIDKPIL 180
KAGRAYHKYK AKRNCWPRVQ GVAMNPVEHP FGGDNHQHIG KPSTIRRDAP AGRKVGLIAA 240
RRTGRLRGTK TVQEKEN 257 
Gene Ontology
 GO:0015934; C:large ribosomal subunit; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:InterPro. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR022666; Rbsml_prot_L2_RNA-bd_dom.
 IPR014722; Rib_L2_dom2.
 IPR002171; Ribosomal_L2.
 IPR023672; Ribosomal_L2_arc.
 IPR022669; Ribosomal_L2_C.
 IPR014726; Ribosomal_L2_dom3.
 IPR008991; Translation_prot_SH3-like. 
Pfam
 PF00181; Ribosomal_L2
 PF03947; Ribosomal_L2_C 
SMART
  
PROSITE
  
PRINTS