CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010228
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable D,D-dipeptide-binding periplasmic protein DdpA 
Protein Synonyms/Alias
  
Gene Name
 ddpA 
Gene Synonyms/Alias
 yddS; b1487; JW5240 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
139EAFPKDLKIDAPDEHacetylation[1]
201GSGPFMLKSWQKGQQacetylation[1]
449YENSEVDKLLRNALAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618] 
Functional Description
 Part of the ABC transporter complex DdpABCDF, which is probably involved in D,D-dipeptide transport. 
Sequence Annotation
  
Keyword
 Complete proteome; Peptide transport; Periplasm; Protein transport; Reference proteome; Signal; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 516 AA 
Protein Sequence
MKRSISFRPT LLALVLATNF PVAHAAVPKD MLVIGKAADP QTLDPAVTID NNDWTVTYPS 60
YQRLVQYKTD GDKGSTDVEG DLASSWKASD DQKEWTFTLK DNAKFADGTP VTAEAVKLSF 120
ERLLKIGQGP AEAFPKDLKI DAPDEHTVKF TLSQPFAPFL YTLANDGASI INPAVLKEHA 180
ADDARGFLAQ NTAGSGPFML KSWQKGQQLV LVPNPHYPGN KPNFKRVSVK IIGESASRRL 240
QLSRGDIDIA DALPVDQLNA LKQENKVNVA EYPSLRVTYL YLNNSKAPLN QADLRRAISW 300
STDYQGMVNG ILSGNGKQMR GPIPEGMWGY DATAMQYNHD ETKAKAEWDK VTSKPTSLTF 360
LYSDNDPNWE PIALATQSSL NKLGIIVKLE KLANATMRDR VGKGDYDIAI GNWSPDFADP 420
YMFMNYWFES DKKGLPGNRS FYENSEVDKL LRNALATTDQ TQRTRDYQQA QKIVIDDAAY 480
VYLFQKNYQL AMNKEVKGFV FNPMLEQVFN INTMSK 516 
Gene Ontology
 GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
 GO:0005215; F:transporter activity; IEA:InterPro.
 GO:0015833; P:peptide transport; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW. 
Interpro
 IPR000914; SBP_bac_5.
 IPR023765; SBP_bac_5_CS. 
Pfam
 PF00496; SBP_bac_5 
SMART
  
PROSITE
 PS01040; SBP_BACTERIAL_5 
PRINTS