CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017495
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DDB1- and CUL4-associated factor 8 
Protein Synonyms/Alias
 WD repeat-containing protein 42A 
Gene Name
 Dcaf8 
Gene Synonyms/Alias
 D1Ucla4; H326; Wdr42a 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
230LDFESGHKSNVFQAKubiquitination[1]
237KSNVFQAKFLPNSGDubiquitination[1]
268LSATQCCKNTKRVAQubiquitination[1]
315RQDRPASKLVVTKEKubiquitination[1]
357VRIYDQRKIDENENNubiquitination[1]
369ENNGVLKKFCPHHLVubiquitination[1]
432HRNNATVKGVNFYGPubiquitination[1]
513STELTGLKEVIKKNKubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex (By similarity). 
Sequence Annotation
 REPEAT 185 224 WD 1.
 REPEAT 228 269 WD 2.
 REPEAT 275 315 WD 3.
 REPEAT 323 363 WD 4.
 REPEAT 379 418 WD 5.
 REPEAT 426 466 WD 6.
 REPEAT 470 509 WD 7.
 MOD_RES 100 100 Phosphoserine.
 MOD_RES 123 123 Phosphoserine (By similarity).
 MOD_RES 124 124 Phosphoserine (By similarity).
 MOD_RES 198 198 Omega-N-methylarginine; by PRMT1 (By  
Keyword
 Alternative splicing; Complete proteome; Methylation; Phosphoprotein; Reference proteome; Repeat; Ubl conjugation pathway; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 591 AA 
Protein Sequence
MSNKRPNTTD GRTDLANGSL SSSPEEMSGA EEGRETSSGI EVEASDLSLS LTGDDGGPNR 60
TSTESRGTDT ESSGEEKDSD SMEDTGHYSI NDESRGHGHS DEEDEEQPRH RGQRKRASRD 120
QDSSDDERAL EDWVSSETTA LPRPRWQALP ALRERELGSS ARFVYEACGA RVFVQRFRLQ 180
HGLEGHTGCV NTLHFNQRGT WLASGSDDLK VVVWDWVRRQ PVLDFESGHK SNVFQAKFLP 240
NSGDSTLAMC ARDGQVRVAE LSATQCCKNT KRVAQHKGAS HKLALEPDSP CTFLSAGEDA 300
VVFTIDLRQD RPASKLVVTK EKEKKVGLYT IYVNPANTHQ FAVGGRDQYV RIYDQRKIDE 360
NENNGVLKKF CPHHLVNSES KANITCLVYS HDGTELLASY NDEDIYLFNS SHSDGAQYIK 420
RYKGHRNNAT VKGVNFYGPK SEFVVSGSDC GHIFLWEKSS CQIIQFMEGD KGGVVNCLEP 480
HPHLPVLATS GLDHDVKIWA PTAEASTELT GLKEVIKKNK RERDEDSLHH TDLFDSHMLW 540
FLMHHLRQRR HHRRWREPGV GATDADSDES PSSSDTSDEE EGPDRVQCMP S 591 
Gene Ontology
 GO:0080008; C:Cul4-RING ubiquitin ligase complex; ISS:UniProtKB.
 GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway. 
Interpro
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS