CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003430
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribosomal RNA small subunit methyltransferase D 
Protein Synonyms/Alias
 16S rRNA m2G966 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 
Gene Name
 rsmD 
Gene Synonyms/Alias
 yhhF; b3465; JW3430 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
93AVSQQLIKNLATLKAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Methyltransferase; Reference proteome; rRNA processing; S-adenosyl-L-methionine; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 198 AA 
Protein Sequence
MKKPNHSGSG QIRIIGGQWR GRKLPVPDSP GLRPTTDRVR ETLFNWLAPV IVDAQCLDCF 60
AGSGALGLEA LSRYAAGATL IEMDRAVSQQ LIKNLATLKA GNARVVNSNA MSFLAQKGTP 120
HNIVFVDPPF RRGLLEETIN LLEDNGWLAD EALIYVESEV ENGLPTVPAN WSLHREKVAG 180
QVAYRLYQRE AQGESDAD 198 
Gene Ontology
 GO:0052913; F:16S rRNA (guanine(966)-N(2))-methyltransferase activity; IDA:EcoCyc.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0070475; P:rRNA base methylation; IMP:EcoCyc. 
Interpro
 IPR002052; DNA_methylase_N6_adenine_CS.
 IPR004398; RNA_MeTrfase_RsmD. 
Pfam
 PF03602; Cons_hypoth95 
SMART
  
PROSITE
 PS00092; N6_MTASE 
PRINTS