CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044821
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Chromosome 18 open reading frame 37, isoform CRA_a 
Protein Synonyms/Alias
 INO80 complex subunit C 
Gene Name
 INO80C 
Gene Synonyms/Alias
 C18orf37; hCG_2020980 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
54NRTWKNLKQILASERubiquitination[1, 2]
82IDAPPSFKPAKKYSDubiquitination[1, 3]
86PSFKPAKKYSDVSGLubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 137 AA 
Protein Sequence
MEAMSENKMV PSEFSTGPVE KAAKPLPFKD PNFVHSGHGG AVAGKKNRTW KNLKQILASE 60
RALPWQLNDP NYFSIDAPPS FKPAKKYSDV SGLLANYTDP QSKLRFSTIE EFSYIRRLPS 120
DVVTGYLALR KATSIVP 137 
Gene Ontology
  
Interpro
 IPR013272; YL1_C. 
Pfam
 PF08265; YL1_C 
SMART
 SM00993; YL1_C 
PROSITE
  
PRINTS