CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042051
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Transcription initiation factor TFIID subunit 6 
Protein Synonyms/Alias
  
Gene Name
 TAF6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
211IYLMRMVKALMDNPTmethylation[1]
285RITKTFTKSWVDEKTubiquitination[2]
353HVQSLLLKHCAPVLAubiquitination[2]
389LLCSQVVKARAQAALubiquitination[2]
Reference
 [1] Large-scale global identification of protein lysine methylation in vivo.
 Cao XJ, Arnaudo AM, Garcia BA.
 Epigenetics. 2013 May 1;8(5):477-85. [PMID: 23644510]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 601 AA 
Protein Sequence
MHMGKRQKLT TSDIDYALKL KNVEPLYGFH AQEFIPFRFA SGGGRELYFY EEKEVDLSDI 60
INTPLPRVPL DVCLKAPKEQ QKAEATEPLK SAKPGQEEDG PLKGKGQGAT TADGKGKEKK 120
APPLLEGAPL RLKPRSIHEL SVEQQLYYKE ITEACVGSCE AKRAEALQSI ATDPGLYQML 180
PRFSTFISEG VRVNVVQNNL ALLIYLMRMV KALMDNPTLY LEKYVHELIP AVMTCIVSRQ 240
LCLRPDVDNH WALRDFAARL VAQICKHFST TTNNIQSRIT KTFTKSWVDE KTPWTTRYGS 300
IAGLAELGHD VIKTLILPRL QQEGERIRSV LDGPVLSNID RIGADHVQSL LLKHCAPVLA 360
KLRPPPDNQD AYRAEFGSLG PLLCSQVVKA RAQAALQAQQ VNRTTLTITQ PRPTLTLSQA 420
PQPGPRTPGL LKVPGSIALP VQTLVSARAA APPQPSPPPT KFIVMSSSSS APSTQQVLSL 480
STSAPGSGST TTSPVTTTVP SVQPIVKLVS TATTAPPSTA PSGPGSVQKY IVVSLPPTGE 540
GKGGPTSHPS PVPPPASSPS PLSGSALCGG KQEAGDSPPP APGTPKANGS QPNSGSPQPA 600
P 601 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0051090; P:regulation of sequence-specific DNA binding transcription factor activity; IEA:InterPro. 
Interpro
 IPR011442; DUF1546. 
Pfam
 PF07571; DUF1546 
SMART
  
PROSITE
  
PRINTS