CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008868
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonuclease Z 
Protein Synonyms/Alias
 RNase Z; tRNA 3 endonuclease; tRNase Z 
Gene Name
 rnz 
Gene Synonyms/Alias
 yqjK; BSU23840 
Created Date
 July 27, 2013 
Organism
 Bacillus subtilis (strain 168) 
NCBI Taxa ID
 224308 
Lysine Modification
Position
Peptide
Type
References
201NDFLEPPKKGRSVVFacetylation[1]
Reference
 [1] The acetylproteome of Gram-positive model bacterium Bacillus subtilis.
 Kim D, Yu BJ, Kim JA, Lee YJ, Choi SG, Kang S, Pan JG.
 Proteomics. 2013 May;13(10-11):1726-36. [PMID: 23468065
Functional Description
 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA. 
Sequence Annotation
 ACT_SITE 67 67 Proton acceptor (Potential).
 METAL 63 63 Zinc 1; catalytic.
 METAL 65 65 Zinc 1; catalytic.
 METAL 67 67 Zinc 2; catalytic.
 METAL 68 68 Zinc 2; catalytic.
 METAL 140 140 Zinc 1; catalytic.
 METAL 211 211 Zinc 1; catalytic.
 METAL 211 211 Zinc 2; catalytic.
 METAL 269 269 Zinc 2; catalytic.  
Keyword
 3D-structure; Complete proteome; Endonuclease; Hydrolase; Metal-binding; Nuclease; Reference proteome; tRNA processing; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 307 AA 
Protein Sequence
MELLFLGTGA GIPAKARNVT SVALKLLEER RSVWLFDCGE ATQHQILHTT IKPRKIEKIF 60
ITHMHGDHVY GLPGLLGSRS FQGGEDELTV YGPKGIKAFI ETSLAVTKTH LTYPLAIQEI 120
EEGIVFEDDQ FIVTAVSVIH GVEAFGYRVQ EKDVPGSLKA DVLKEMNIPP GPVYQKIKKG 180
ETVTLEDGRI INGNDFLEPP KKGRSVVFSG DTRVSDKLKE LARDCDVLVH EATFAKEDRK 240
LAYDYYHSTT EQAAVTAKEA RAKQLILTHI SARYQGDASL ELQKEAVDVF PNSVAAYDFL 300
EVNVPRG 307 
Gene Ontology
 GO:0042781; F:3'-tRNA processing endoribonuclease activity; IEA:HAMAP.
 GO:0008270; F:zinc ion binding; IEA:HAMAP.
 GO:0042779; P:tRNA 3'-trailer cleavage; IEA:InterPro. 
Interpro
 IPR001279; Beta-lactamas-like.
 IPR013471; RNase_Z. 
Pfam
  
SMART
 SM00849; Lactamase_B 
PROSITE
  
PRINTS