CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013111
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Regulator of microtubule dynamics protein 3 
Protein Synonyms/Alias
 RMD-3; mRMD-3; Protein FAM82A2; Protein FAM82C 
Gene Name
 Rmdn3 
Gene Synonyms/Alias
 Fam82a2; Fam82c 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
306KSYALNGKEEAEAALacetylation[1]
306KSYALNGKEEAEAALubiquitination[2]
434KCYRELGKNSEARKWacetylation[1, 3]
Reference
 [1] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [3] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123
Functional Description
 Involved in cellular calcium homeostasis regulation (By similarity). May participate in differentiation and apoptosis of keratinocytes. Overexpression induces apoptosis (By similarity). 
Sequence Annotation
 MOD_RES 44 44 Phosphoserine (By similarity).
 MOD_RES 46 46 Phosphoserine.
 MOD_RES 50 50 Phosphoserine.
 MOD_RES 189 189 Phosphoserine.
 MOD_RES 212 212 Phosphoserine.  
Keyword
 Apoptosis; Coiled coil; Complete proteome; Cytoplasm; Cytoskeleton; Differentiation; Membrane; Microtubule; Mitochondrion; Mitochondrion outer membrane; Nucleus; Phosphoprotein; Reference proteome; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 470 AA 
Protein Sequence
MSRLGALGGS RAGLGLLLGT AAGLGFLCVL YSQRWKRTQR HGRSHSLPNS LDYAQASERG 60
RQVTQFRAIP GEAGDAAILP SLSQEGQEKV LDRLDFVLTS LMALRREVEE LQRSLQGLAG 120
EIVGEVRSHI EENQRVARRR RFPFARERSD STGSSSVYFT ASSGAALTDA ESEGGYTTAN 180
AESDYERDSD KESGDAEDEV SCETVRMGRK DSLDLDVEAA SSPAAAALEE DDSSGREDVQ 240
LVLLQADELH QGSKQDKREG FQLLLNNKLA YGSRQDFLWR LARAYSDMSD LTEEESGKKS 300
YALNGKEEAE AALKKGDESA ACHLWYAVLC GQLAEHEGIS KRIQSGFSFK EHVDKAIELQ 360
PEDPRGHFLL GRWCYQVSHL NWLEKKTATA LFESPLSATV QDALQSFLKA EELQPGFSKA 420
GRVYISKCYR ELGKNSEARK WMKLAQELPD VTNEDSAFQK DLEELEVILG 470 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005874; C:microtubule; IEA:UniProtKB-KW.
 GO:0005741; C:mitochondrial outer membrane; ISS:UniProtKB.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
 GO:0006874; P:cellular calcium ion homeostasis; ISS:UniProtKB. 
Interpro
 IPR011990; TPR-like_helical. 
Pfam
  
SMART
  
PROSITE
  
PRINTS