CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009489
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ADP-ribosylation factor 6 
Protein Synonyms/Alias
  
Gene Name
 Arf6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
7*MGKVLSKIFGNKEMacetylation[1]
34TTILYKLKLGQSVTTubiquitination[2]
58TVTYKNVKFNVWDVGacetylation[1]
69WDVGGQDKIRPLWRHacetylation[3]
69WDVGGQDKIRPLWRHubiquitination[2]
138KPHEIQEKLGLTRIRubiquitination[2]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [3] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
 GTP-binding protein involved in protein trafficking; regulates endocytic recycling and cytoskeleton remodeling. May modulate vesicle budding and uncoating within the Golgi apparatus Contributes to the regulation of dendritic branching and filopodia extension (By similarity). Involved in the regulation of dendritic spine development. 
Sequence Annotation
 NP_BIND 20 27 GTP (By similarity).
 NP_BIND 63 67 GTP (By similarity).
 NP_BIND 122 125 GTP (By similarity).
 LIPID 2 2 N-myristoyl glycine (By similarity).  
Keyword
 3D-structure; Cell membrane; Cell projection; Complete proteome; Differentiation; Endosome; ER-Golgi transport; Golgi apparatus; GTP-binding; Lipoprotein; Membrane; Myristate; Neurogenesis; Nucleotide-binding; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 175 AA 
Protein Sequence
MGKVLSKIFG NKEMRILMLG LDAAGKTTIL YKLKLGQSVT TIPTVGFNVE TVTYKNVKFN 60
VWDVGGQDKI RPLWRHYYTG TQGLIFVVDC ADRDRIDEAR QELHRIINDR EMRDAIILIF 120
ANKQDLPDAM KPHEIQEKLG LTRIRDRNWY VQPSCATSGD GLYEGLTWLT SNYKS 175 
Gene Ontology
 GO:0005938; C:cell cortex; IEA:Compara.
 GO:0005769; C:early endosome; IEA:Compara.
 GO:0030139; C:endocytic vesicle; ISS:UniProtKB.
 GO:0005768; C:endosome; ISS:UniProtKB.
 GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.
 GO:0031527; C:filopodium membrane; IEA:UniProtKB-SubCell.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0005886; C:plasma membrane; IDA:MGI.
 GO:0055037; C:recycling endosome; IEA:Compara.
 GO:0001726; C:ruffle; IEA:Compara.
 GO:0005525; F:GTP binding; TAS:BHF-UCL.
 GO:0003924; F:GTPase activity; TAS:BHF-UCL.
 GO:0006915; P:apoptotic process; IMP:MGI.
 GO:0030866; P:cortical actin cytoskeleton organization; IEA:Compara.
 GO:0090162; P:establishment of epithelial cell polarity; IMP:MGI.
 GO:0001889; P:liver development; IMP:MGI.
 GO:0030838; P:positive regulation of actin filament polymerization; IEA:Compara.
 GO:0090004; P:positive regulation of establishment of protein localization to plasma membrane; IDA:BHF-UCL.
 GO:0034394; P:protein localization to cell surface; IDA:BHF-UCL.
 GO:0015031; P:protein transport; TAS:MGI.
 GO:0060998; P:regulation of dendritic spine development; IMP:UniProtKB.
 GO:0051489; P:regulation of filopodium assembly; IEA:Compara.
 GO:0035020; P:regulation of Rac protein signal transduction; IEA:Compara.
 GO:0034143; P:regulation of toll-like receptor 4 signaling pathway; NAS:BHF-UCL.
 GO:0031529; P:ruffle organization; IEA:Compara.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
 GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR024156; Small_GTPase_ARF.
 IPR006689; Small_GTPase_ARF/SAR. 
Pfam
 PF00025; Arf 
SMART
 SM00177; ARF 
PROSITE
 PS51417; ARF 
PRINTS
 PR00328; SAR1GTPBP.