CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008332
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 6,7-dimethyl-8-ribityllumazine synthase 
Protein Synonyms/Alias
 DMRL synthase; LS; Lumazine synthase 
Gene Name
 RIB4 
Gene Synonyms/Alias
 YOL143C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
17DQVYDGSKIRVGIIHacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. 
Sequence Annotation
 REGION 61 63 5-amino-6-(D-ribitylamino)uracil binding.
 REGION 90 92 5-amino-6-(D-ribitylamino)uracil binding.
 REGION 95 96 1-deoxy-L-glycero-tetrulose 4-phosphate
 ACT_SITE 98 98 Proton donor (Potential).
 BINDING 27 27 5-amino-6-(D-ribitylamino)uracil.
 BINDING 123 123 5-amino-6-(D-ribitylamino)uracil; via
 BINDING 137 137 1-deoxy-L-glycero-tetrulose 4-phosphate.  
Keyword
 3D-structure; Complete proteome; Reference proteome; Riboflavin biosynthesis; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 169 AA 
Protein Sequence
MAVKGLGKPD QVYDGSKIRV GIIHARWNRV IIDALVKGAI ERMASLGVEE NNIIIETVPG 60
SYELPWGTKR FVDRQAKLGK PLDVVIPIGV LIKGSTMHFE YISDSTTHAL MNLQEKVDMP 120
VIFGLLTCMT EEQALARAGI DEAHSMHNHG EDWGAAAVEM AVKFGKNAF 169 
Gene Ontology
 GO:0005758; C:mitochondrial intermembrane space; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0009349; C:riboflavin synthase complex; IEA:InterPro.
 GO:0000906; F:6,7-dimethyl-8-ribityllumazine synthase activity; IGI:SGD.
 GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
 GO:0009231; P:riboflavin biosynthetic process; IMP:SGD. 
Interpro
 IPR002180; DMRL_synthase. 
Pfam
 PF00885; DMRL_synthase 
SMART
  
PROSITE
  
PRINTS