CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006910
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 GCR1-dependent translation factor 1 
Protein Synonyms/Alias
  
Gene Name
 GDT1 
Gene Synonyms/Alias
 YBR187W; YBR1310 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
158QDMDDVEKGGDTAYDubiquitination[1, 2]
166GGDTAYDKQLKNASIubiquitination[2]
Reference
 [1] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 May be involved in ribosome biogenesis. Has also been proposed to play a role in calcium homeostasis (PubMed:23569283). 
Sequence Annotation
  
Keyword
 Complete proteome; Golgi apparatus; Membrane; Reference proteome; Transmembrane; Transmembrane helix; Vacuole. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 280 AA 
Protein Sequence
MGNMIKKASL IALLPLFTAA AAAATDAETS MESGSSSHLK SFLMSVSMIG LSEIGDKTFL 60
IAALMAMRHK RVLVFSAAAT SLAIMTILSG VVGHSAVAFL SERYTAFFAG ILFLVFGYKL 120
TMEGLEMSKD AGVEEEMAEV EEEIAIKDMN QDMDDVEKGG DTAYDKQLKN ASIGKKIVHR 180
IRELASFMFS PVWVQIFLMV FLGELGDRSQ ISIIAMATDS DYWYVIAGAV IGHAICSGLA 240
VVGGKLLATR ISIRTITLAS SLLFFIFALM YIYQAFTTQD 280 
Gene Ontology
 GO:0005801; C:cis-Golgi network; IDA:SGD.
 GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.
 GO:0005797; C:Golgi medial cisterna; IDA:SGD.
 GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; ISM:SGD.
 GO:0006874; P:cellular calcium ion homeostasis; IMP:UniProtKB. 
Interpro
 IPR001727; UPF0016. 
Pfam
 PF01169; UPF0016 
SMART
  
PROSITE
 PS01214; UPF0016 
PRINTS