CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011601
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein YNG1 
Protein Synonyms/Alias
 ING1 homolog 1 
Gene Name
 YNG1 
Gene Synonyms/Alias
 YOR064C; YOR29-15 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
42MQTIDLFKNEEDEPGubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Histone-binding component of the NuA3 histone acetyltransferase complex, that acetylates Lys-14 of histone H3. Recruitment of NuA3 to nucleosomes requires methylated histone H3. In conjunction with the FACT complex, NuA3 may be involved in transcriptional regulation. YNG1 is required for the HAT activity of NuA3 but not for its integrity. Mediates the interaction of SAS3 with nucleosomes. 
Sequence Annotation
 ZN_FING 155 204 PHD-type; degenerate.
 BINDING 157 157 Histone H3K4me3 (By similarity).
 BINDING 168 168 Histone H3K4me3 (By similarity).
 BINDING 172 172 Histone H3K4me3 (By similarity).
 BINDING 180 180 Histone H3K4me3 (By similarity).  
Keyword
 3D-structure; Complete proteome; Metal-binding; Nucleus; Reference proteome; Transcription; Transcription regulation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 219 AA 
Protein Sequence
MEHLANENSD SDIRYSFLST LDHLPCELIR SLRLMQTIDL FKNEEDEPGM ERACRDLLLV 60
ATYINDLVDD QIHFLKQHKK ELEIQKSVTK NFNSSLENIK SKLTLEEPGA YKEPKLLLKI 120
NLKKAKSRER KESITSPTIG INQGDVTEGN NNQEEVYCFC RNVSYGPMVA CDNPACPFEW 180
FHYGCVGLKQ APKGKWYCSK DCKEIANQRS KSKRQKRRK 219 
Gene Ontology
 GO:0033100; C:NuA3 histone acetyltransferase complex; IDA:SGD.
 GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0016573; P:histone acetylation; IDA:SGD.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF00628; PHD 
SMART
 SM00249; PHD 
PROSITE
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2 
PRINTS