CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003047
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Holliday junction ATP-dependent DNA helicase RuvA 
Protein Synonyms/Alias
  
Gene Name
 ruvA 
Gene Synonyms/Alias
 b1861; JW1850 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
66LLYGFNNKQERTLFKacetylation[1]
73KQERTLFKELIKTNGacetylation[1]
77TLFKELIKTNGVGPKacetylation[1]
129ERLIVEMKDRFKGLHacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. Binds both single- and double-stranded DNA (dsDNA). Binds preferentially to supercoiled rather than to relaxed dsDNA. 
Sequence Annotation
  
Keyword
 3D-structure; ATP-binding; Complete proteome; Cytoplasm; DNA damage; DNA recombination; DNA repair; DNA-binding; Helicase; Hydrolase; Nucleotide-binding; Reference proteome; SOS response. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 203 AA 
Protein Sequence
MIGRLRGIII EKQPPLVLIE VGGVGYEVHM PMTCFYELPE AGQEAIVFTH FVVREDAQLL 60
YGFNNKQERT LFKELIKTNG VGPKLALAIL SGMSAQQFVN AVEREEVGAL VKLPGIGKKT 120
AERLIVEMKD RFKGLHGDLF TPAADLVLTS PASPATDDAE QEAVAALVAL GYKPQEASRM 180
VSKIARPDAS SETLIREALR AAL 203 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0009379; C:Holliday junction helicase complex; IDA:EcoCyc.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0009378; F:four-way junction helicase activity; IDA:EcoCyc.
 GO:0000725; P:recombinational repair; IMP:EcoCyc.
 GO:0009432; P:SOS response; IEP:EcoCyc. 
Interpro
 IPR011114; DNA_helicas_Holl-junc_RuvA_C.
 IPR013849; DNA_helicase_Holl-junc_RuvA_I.
 IPR003583; Hlx-hairpin-Hlx_DNA-bd_motif.
 IPR012340; NA-bd_OB-fold.
 IPR000085; RuvA.
 IPR010994; RuvA_2-like. 
Pfam
 PF07499; RuvA_C
 PF01330; RuvA_N 
SMART
 SM00278; HhH1 
PROSITE
  
PRINTS