CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023041
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Lymphoid enhancer-binding factor 1 
Protein Synonyms/Alias
 LEF-1; T cell-specific transcription factor 1-alpha; TCF1-alpha 
Gene Name
 LEF1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
373SFPTCKAKAATPGPLubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Participates in the Wnt signaling pathway. Activates transcription of target genes in the presence of CTNNB1 and EP300. May play a role in hair cell differentiation and follicle morphogenesis. TLE1, TLE2, TLE3 and TLE4 repress transactivation mediated by LEF1 and CTNNB1. Regulates T-cell receptor alpha enhancer function. Binds DNA in a sequence-specific manner. PIAG antagonizes both Wnt-dependent and Wnt-independent activation by LEF1 (By similarity). Isoform 3 lacks the CTNNB1 interaction domain and may be an antagonist for Wnt signaling. Isoform 5 transcriptionally activates the fibronectin promoter, binds to and represses transcription from the E-cadherin promoter in a CTNNB1- independent manner, and is involved in reducing cellular aggregation and increasing cell migration of pancreatic cancer cells. Isoform 1 transcriptionally activates MYC and CCND1 expression and enhances proliferation of pancreatic tumor cells. 
Sequence Annotation
 DNA_BIND 299 367 HMG box.
 REGION 1 62 CTNNB1-binding (By similarity).
 MOD_RES 132 132 Phosphoserine.
 MOD_RES 155 155 Phosphothreonine; by NLK (Probable).
 MOD_RES 166 166 Phosphoserine; by NLK (Probable).
 CROSSLNK 27 27 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 269 269 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Activator; Alternative promoter usage; Alternative splicing; Complete proteome; Direct protein sequencing; DNA-binding; Isopeptide bond; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Transcription; Transcription regulation; Ubl conjugation; Wnt signaling pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 399 AA 
Protein Sequence
MPQLSGGGGG GGGDPELCAT DEMIPFKDEG DPQKEKIFAE ISHPEEEGDL ADIKSSLVNE 60
SEIIPASNGH EVARQAQTSQ EPYHDKAREH PDDGKHPDGG LYNKGPSYSS YSGYIMMPNM 120
NNDPYMSNGS LSPPIPRTSN KVPVVQPSHA VHPLTPLITY SDEHFSPGSH PSHIPSDVNS 180
KQGMSRHPPA PDIPTFYPLS PGGVGQITPP LGWFSHHMIP GPPGPHTTGI PHPAIVTPQV 240
KQEHPHTDSD LMHVKPQHEQ RKEQEPKRPH IKKPLNAFML YMKEMRANVV AECTLKESAA 300
INQILGRRWH ALSREEQAKY YELARKERQL HMQLYPGWSA RDNYGKKKKR KREKLQESAS 360
GGKRSSFPTC KAKAATPGPL LEMEAC 386 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0032993; C:protein-DNA complex; IDA:BHF-UCL.
 GO:0005667; C:transcription factor complex; IDA:BHF-UCL.
 GO:0008013; F:beta-catenin binding; IDA:BHF-UCL.
 GO:0003682; F:chromatin binding; IBA:RefGenome.
 GO:0043027; F:cysteine-type endopeptidase inhibitor activity involved in apoptotic process; IMP:UniProtKB.
 GO:0008301; F:DNA binding, bending; ISS:UniProtKB.
 GO:0035326; F:enhancer binding; IDA:UniProtKB.
 GO:0030284; F:estrogen receptor activity; IDA:UniProtKB.
 GO:0030331; F:estrogen receptor binding; IDA:UniProtKB.
 GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IBA:RefGenome.
 GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:BHF-UCL.
 GO:0001228; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IMP:BHF-UCL.
 GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
 GO:0060033; P:anatomical structure regression; IEA:Compara.
 GO:0060561; P:apoptotic process involved in morphogenesis; IBA:RefGenome.
 GO:0042100; P:B cell proliferation; IBA:RefGenome.
 GO:0030509; P:BMP signaling pathway; IBA:RefGenome.
 GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.
 GO:0060326; P:cell chemotaxis; IDA:UniProtKB.
 GO:0071353; P:cellular response to interleukin-4; IDA:UniProtKB.
 GO:0060710; P:chorio-allantoic fusion; IBA:RefGenome.
 GO:0021542; P:dentate gyrus development; IBA:RefGenome.
 GO:0030326; P:embryonic limb morphogenesis; IBA:RefGenome.
 GO:0001837; P:epithelial to mesenchymal transition; ISS:BHF-UCL.
 GO:0048069; P:eye pigmentation; IBA:RefGenome.
 GO:0060325; P:face morphogenesis; IBA:RefGenome.
 GO:0021873; P:forebrain neuroblast division; IBA:RefGenome.
 GO:0021879; P:forebrain neuron differentiation; IBA:RefGenome.
 GO:0021861; P:forebrain radial glial cell differentiation; IBA:RefGenome.
 GO:0021943; P:formation of radial glial scaffolds; IBA:RefGenome.
 GO:0043966; P:histone H3 acetylation; IMP:UniProtKB.
 GO:0043967; P:histone H4 acetylation; IMP:UniProtKB.
 GO:0021854; P:hypothalamus development; IBA:RefGenome.
 GO:0006917; P:induction of apoptosis; IBA:RefGenome.
 GO:0030879; P:mammary gland development; IBA:RefGenome.
 GO:0048747; P:muscle fiber development; IBA:RefGenome.
 GO:0071866; P:negative regulation of apoptotic process in bone marrow; IMP:UniProtKB.
 GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IMP:UniProtKB.
 GO:0022408; P:negative regulation of cell-cell adhesion; IDA:UniProtKB.
 GO:0043392; P:negative regulation of DNA binding; IDA:UniProtKB.
 GO:0071899; P:negative regulation of estrogen receptor binding; IDA:UniProtKB.
 GO:0032696; P:negative regulation of interleukin-13 production; IDA:UniProtKB.
 GO:0032713; P:negative regulation of interleukin-4 production; IDA:UniProtKB.
 GO:0032714; P:negative regulation of interleukin-5 production; IDA:UniProtKB.
 GO:0045843; P:negative regulation of striated muscle tissue development; IEA:Compara.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.
 GO:0001755; P:neural crest cell migration; IBA:RefGenome.
 GO:0030223; P:neutrophil differentiation; IMP:UniProtKB.
 GO:0071895; P:odontoblast differentiation; IBA:RefGenome.
 GO:0042475; P:odontogenesis of dentin-containing tooth; IEA:Compara.
 GO:0001649; P:osteoblast differentiation; IEP:UniProtKB.
 GO:0060021; P:palate development; ISS:BHF-UCL.
 GO:0048341; P:paraxial mesoderm formation; IBA:RefGenome.
 GO:0001569; P:patterning of blood vessels; IBA:RefGenome.
 GO:0043923; P:positive regulation by host of viral transcription; IDA:UniProtKB.
 GO:0090068; P:positive regulation of cell cycle process; IDA:UniProtKB.
 GO:0030307; P:positive regulation of cell growth; IMP:UniProtKB.
 GO:0030335; P:positive regulation of cell migration; IDA:UniProtKB.
 GO:0008284; P:positive regulation of cell proliferation; IDA:UniProtKB.
 GO:0071864; P:positive regulation of cell proliferation in bone marrow; IMP:UniProtKB.
 GO:0022409; P:positive regulation of cell-cell adhesion; IDA:UniProtKB.
 GO:0010718; P:positive regulation of epithelial to mesenchymal transition; IMP:UniProtKB.
 GO:0030854; P:positive regulation of granulocyte differentiation; IDA:UniProtKB.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.
 GO:0022407; P:regulation of cell-cell adhesion; IEA:Compara.
 GO:0016202; P:regulation of striated muscle tissue development; IBA:RefGenome.
 GO:0050909; P:sensory perception of taste; IEA:Compara.
 GO:0001756; P:somitogenesis; IBA:RefGenome.
 GO:0002040; P:sprouting angiogenesis; IBA:RefGenome.
 GO:0033153; P:T cell receptor V(D)J recombination; IEA:Compara.
 GO:0045063; P:T-helper 1 cell differentiation; ISS:UniProtKB.
 GO:0043586; P:tongue development; IEA:Compara.
 GO:0061153; P:trachea gland development; IBA:RefGenome. 
Interpro
 IPR027397; Catenin_binding_dom.
 IPR013558; CTNNB1-bd_N.
 IPR009071; HMG_box_dom.
 IPR024940; TCF/LEF. 
Pfam
 PF08347; CTNNB1_binding
 PF00505; HMG_box 
SMART
 SM00398; HMG 
PROSITE
 PS50118; HMG_BOX_2 
PRINTS