CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008711
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Coatomer subunit zeta 
Protein Synonyms/Alias
 Zeta-coat protein; Zeta-COP 
Gene Name
 RET3 
Gene Synonyms/Alias
 YPL010W; LPA7W; YP8132.03 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
60QLYRKTHKQDSEILIubiquitination[1]
117ILNSGMDKKNIQENYacetylation[2]
178LGAWGFAKSKFQERLacetylation[2]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. 
Sequence Annotation
  
Keyword
 Complete proteome; Cytoplasm; Cytoplasmic vesicle; ER-Golgi transport; Golgi apparatus; Membrane; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 189 AA 
Protein Sequence
MSSLSLYTVQ AVLILDQQGE RIYAKYYQPP HRSDEGHQLL FNSVKKQKEF EKQLYRKTHK 60
QDSEILIFED HLVLYKEYID ITIYLVASLE ENEIVLQQGF SAIRGALDLI LNSGMDKKNI 120
QENYDMVLLA IDETIDNGVI LETDSNTIAS RVSKPPTNEP QMALDLDKGF LGAWGFAKSK 180
FQERLQQGL 189 
Gene Ontology
 GO:0030126; C:COPI vesicle coat; IMP:SGD.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD. 
Interpro
 IPR022775; AP_mu_sigma_su.
 IPR011012; Longin-like_dom. 
Pfam
 PF01217; Clat_adaptor_s 
SMART
  
PROSITE
 PS00989; CLAT_ADAPTOR_S 
PRINTS