CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011613
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pseudouridine-5'-monophosphatase 
Protein Synonyms/Alias
 5'-PsiMPase; Haloacid dehalogenase-like hydrolase domain-containing protein 1; Haloacid dehalogenase-like hydrolase domain-containing protein 1A; Protein GS1 
Gene Name
 HDHD1 
Gene Synonyms/Alias
 DXF68S1E; FAM16AX; GS1; HDHD1A 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
53KSLVMGKKALEAAQIubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. 
Sequence Annotation
 ACT_SITE 14 14 Nucleophile (By similarity).
 ACT_SITE 16 16 Proton donor (By similarity).
 METAL 14 14 Magnesium (By similarity).
 METAL 16 16 Magnesium (By similarity).  
Keyword
 3D-structure; Alternative splicing; Complete proteome; Hydrolase; Magnesium; Metal-binding; Nucleotide metabolism; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 228 AA 
Protein Sequence
MAAPPQPVTH LIFDMDGLLL DTERLYSVVF QEICNRYDKK YSWDVKSLVM GKKALEAAQI 60
IIDVLQLPMS KEELVEESQT KLKEVFPTAA LMPGAEKLII HLRKHGIPFA LATSSGSASF 120
DMKTSRHKEF FSLFSHIVLG DDPEVQHGKP DPDIFLACAK RFSPPPAMEK CLVFEDAPNG 180
VEAALAAGMQ VVMVPDGNLS RDLTTKATLV LNSLQDFQPE LFGLPSYE 228 
Gene Ontology
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0016791; F:phosphatase activity; IEA:EC.
 GO:0016311; P:dephosphorylation; IEA:GOC.
 GO:0009117; P:nucleotide metabolic process; IEA:UniProtKB-KW. 
Interpro
 IPR023214; HAD-like_dom.
 IPR006402; HAD-SF_hydro_IA_v3. 
Pfam
 PF13419; HAD_2 
SMART
  
PROSITE
  
PRINTS