CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018160
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 General transcription factor IIH subunit 3 
Protein Synonyms/Alias
 Basic transcription factor 2 34 kDa subunit; BTF2 p34; General transcription factor IIH polypeptide 3; TFIIH basal transcription factor complex p34 subunit 
Gene Name
 Gtf2h3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
126LMTKSDIKGQHTETLubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. Anchors XPB (By similarity). 
Sequence Annotation
 ZN_FING 269 286 C4-type.  
Keyword
 Complete proteome; DNA damage; DNA repair; Metal-binding; Nucleus; Reference proteome; Transcription; Transcription regulation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 309 AA 
Protein Sequence
MAADEDELNL LVIIVDTNPI WWGKQALKES QFTLSKCMDA VMVLANSHLF MNRSNQLAVI 60
ASHIQESRLL YPGKNGGLGD FFGDPGNALP DCNPSGSKDG KYELLTVANE VIAEEIKDLM 120
TKSDIKGQHT ETLLAGSLAK ALCYIHRVNK AVKDNQEMKS RILVIKAAED SALQYMNFMN 180
VIFAAQKQNI LIDACVLDSD SGLLQQACDI TGGLYLKVPQ MPSLLQYLLW VFLPDQDQRS 240
QLILPPPIHV DYRAACFCHR SLIEIGYVCS VCLSIFCNFS PICTTCETAF KISLPPVLKA 300
KKKKQKVSL 309 
Gene Ontology
 GO:0000439; C:core TFIIH complex; IEA:InterPro.
 GO:0005675; C:holo TFIIH complex; ISS:UniProtKB.
 GO:0008094; F:DNA-dependent ATPase activity; IEA:Compara.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0008353; F:RNA polymerase II carboxy-terminal domain kinase activity; IEA:Compara.
 GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. 
Interpro
 IPR004600; TFIIH_Tfb4/p34. 
Pfam
 PF03850; Tfb4 
SMART
  
PROSITE
  
PRINTS