CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020461
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 pre-mRNA 3' end processing protein WDR33 
Protein Synonyms/Alias
 WD repeat-containing protein 33; WD repeat-containing protein WDC146 
Gene Name
 WDR33 
Gene Synonyms/Alias
 WDC146 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
65DYNPSVIKYLENRIWubiquitination[1]
109PMNAVTTKFVRTSTNubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Essential for both cleavage and polyadenylation of pre- mRNA 3' ends. 
Sequence Annotation
 REPEAT 117 156 WD 1.
 REPEAT 159 198 WD 2.
 REPEAT 200 239 WD 3.
 REPEAT 242 283 WD 4.
 REPEAT 286 325 WD 5.
 REPEAT 329 369 WD 6.
 REPEAT 373 412 WD 7.
 DOMAIN 618 770 Collagen-like.
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 7 7 Phosphoserine.
 MOD_RES 46 46 N6-acetyllysine.
 MOD_RES 1210 1210 Phosphoserine.  
Keyword
 Acetylation; Alternative splicing; Collagen; Complete proteome; mRNA processing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1336 AA 
Protein Sequence
MATEIGSPPR FFHMPRFQHQ APRQLFYKRP DFAQQQAMQQ LTFDGKRMRK AVNRKTIDYN 60
PSVIKYLENR IWQRDQRDMR AIQPDAGYYN DLVPPIGMLN NPMNAVTTKF VRTSTNKVKC 120
PVFVVRWTPE GRRLVTGASS GEFTLWNGLT FNFETILQAH DSPVRAMTWS HNDMWMLTAD 180
HGGYVKYWQS NMNNVKMFQA HKEAIREARF IHNIPFSVVP IVMVKLFSKC ILGAEMHGLC 240
QFLGNFLHPI NTIFFFVFTH SPFCWHLSEV VLSRYQPLQY VRDVLSAAFC TGFLFSFMIN 300
NVYTLFLFII YCVRQEYFIP NKEFSL 326 
Gene Ontology
 GO:0005581; C:collagen; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0006301; P:postreplication repair; NAS:UniProtKB.
 GO:0007283; P:spermatogenesis; NAS:UniProtKB. 
Interpro
 IPR008160; Collagen.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF01391; Collagen
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS