CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037362
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein transport protein Sec24D 
Protein Synonyms/Alias
  
Gene Name
 SEC24D 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
482VYMNCLLKNCVLLSRubiquitination[1]
611IMGIIQQKRPYSMKLubiquitination[1]
622SMKLTIVKQREQPEMubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 663 AA 
Protein Sequence
MCPFMQFIEG GRRYQCGFCN CVNDVPPFYF QHLDHIGRRL DHYEKPELSL GSYEYVATLD 60
YCRKSKPPNP PAFIFMIDVS YSNIKNGLVK LICEELKTML EKIPKEEQEE TSAIRVGFIT 120
YNKVLHFFNV KSNLAQPQMM VVTDVGEVFV PLLDGFLVNY QESQSVIHNL LDQIPDMFAD 180
SNENETVFAP VIQAGMEALK AADCPGKLFI FHSSLPTAEA PGKLKNRDDK KLVNTDKEKI 240
LFQPQTNVYD SLAKDCVAHG CSVTLFLFPS QYVDVASLGL VPQLTGGTLY KYNNFQMHLD 300
RQQFLNDLRN DIEKKIGFDA IMRVRTSTGF RATDFFGGIL MNNTTDVEMA AIDCDKAVTV 360
EFKHDDKLSE DSGALIQCAV LYTTISGQRR LRIHNLGLNC SSQLADLYKS CETDALINFF 420
AKSAFKAVLH QPLKVIREIL VNQTAHMLAC YRKNCASPSA ASQLILPDSM KVLPVYMNCL 480
LKNCVLLSRP EISTDERAYQ RQLVMTMGVA DSQLFFYPQL LPIHTLDVKS TMLPAAVRCS 540
ESRLSEEGIF LLANGLHMFL WLGVSSPPEL IQGIFNVPSF AHINTDMTLL PEVGNPYSQQ 600
LRMIMGIIQQ KRPYSMKLTI VKQREQPEMV FRQFLVEDKG LYGGSSYVDF LCCVHKEICQ 660
LLN 663 
Gene Ontology
 GO:0030127; C:COPII vesicle coat; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006888; P:ER to Golgi vesicle-mediated transport; IEA:InterPro.
 GO:0006886; P:intracellular protein transport; IEA:InterPro. 
Interpro
 IPR007123; Gelsolin_dom.
 IPR006900; Sec23/24_helical_dom.
 IPR006896; Sec23/24_trunk_dom.
 IPR012990; Sec23_24_beta_S.
 IPR002035; VWF_A.
 IPR006895; Znf_Sec23_Sec24. 
Pfam
 PF00626; Gelsolin
 PF08033; Sec23_BS
 PF04815; Sec23_helical
 PF04811; Sec23_trunk
 PF04810; zf-Sec23_Sec24 
SMART
  
PROSITE
  
PRINTS