CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019350
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase 
Protein Synonyms/Alias
 PNGase; hPNGase; N-glycanase 1; Peptide:N-glycanase 
Gene Name
 NGLY1 
Gene Synonyms/Alias
 PNG1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
123SNKSHKVKSSQQPAAubiquitination[1]
401DTINGLNKQRQLFLSubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Specifically deglycosylates the denatured form of N- linked glycoproteins in the cytoplasm and assists their proteasome-mediated degradation. Cleaves the beta-aspartyl- glucosamine (GlcNAc) of the glycan and the amide side chain of Asn, converting Asn to Asp. Prefers proteins containing high- mannose over those bearing complex type oligosaccharides. Can recognize misfolded proteins in the endoplasmic reticulum that are exported to the cytosol to be destroyed and deglycosylate them, while it has no activity toward native proteins. Deglycosylation is a prerequisite for subsequent proteasome-mediated degradation of some, but not all, misfolded glycoproteins. 
Sequence Annotation
 DOMAIN 30 91 PUB.
 DOMAIN 454 654 PAW.
 ACT_SITE 309 309 Nucleophile (By similarity).
 ACT_SITE 336 336 By similarity.
 ACT_SITE 353 353 By similarity.
 METAL 250 250 Zinc (By similarity).
 METAL 253 253 Zinc (By similarity).
 METAL 283 283 Zinc (By similarity).
 METAL 286 286 Zinc (By similarity).
 MOD_RES 2 2 N-acetylalanine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Cytoplasm; Hydrolase; Metal-binding; Polymorphism; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 654 AA 
Protein Sequence
MAAAALGSSS GSASPAVAEL CQNTPETFLE ASKLLLTYAD NILRNPNDEK YRSIRIGNTA 60
FSTRLLPVRG AVECLFEMGF EEGETHLIFP KKASVEQLQK IRDLIAIERS SRLDGSNKSH 120
KVKSSQQPAA STQLPTTPSS NPSGLNQHTR NRQGQSSDPP SASTVAADSA ILEVLQSNIQ 180
HVLVYENPAL QEKALACIPV QELKRKSQEK LSRARKLDKG INISDEDFLL LELLHWFKEE 240
FFHWVNNVLC SKCGGQTRSR DRSLLPSDDE LKWGAKEVED HYCDACQFSN RFPRYNNPEK 300
LLETRCGRCG EWANCFTLCC RAVGFEARYV WDYTELQRTL SLKLTTLKEI GKTFLRISKR 360
QKLIQVVDVT WRYSCKHEEV IARRTKVKEA LLRDTINGLN KQRQLFLSEN RRKELLQRII 420
VELVEFISPK TPKPGELGGR ISGSVAWRVA RGEMGLQRKE TLFIPCENEK ISKQLHLCYN 480
IVKDRYVRVS NNNQTISGWE NGVWKMESIF RKVETDWHMV YLARKEGSSF AYISWKFECG 540
SVGLKVDSIS IRTSSQTFQT GTVEWKLRSD TAQVELTGDN SLHSYADFSG ATEVILEAEL 600
SRGDGDVAWQ HTQLFRQSLN DHEENCLEII IKFSDL 636 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0000224; F:peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity; IEA:EC.
 GO:0006516; P:glycoprotein catabolic process; IDA:UniProtKB. 
Interpro
 IPR008979; Galactose-bd-like.
 IPR006588; Peptide_N_glycanase_PAW_dom.
 IPR018997; PUB_domain.
 IPR006567; PUG-dom.
 IPR002931; Transglutaminase-like. 
Pfam
 PF04721; DUF750
 PF09409; PUB
 PF01841; Transglut_core 
SMART
 SM00613; PAW
 SM00580; PUG
 SM00460; TGc 
PROSITE
 PS51398; PAW 
PRINTS