CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035340
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Trerf1 
Protein Synonyms/Alias
 Transcriptional regulating factor 1 (Predicted) 
Gene Name
 Trerf1 
Gene Synonyms/Alias
 Trerf1_predicted; rCG_43691 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
72LSLPIGSKNLGQMDAacetylation[1]
563KHPPITAKVEEPLKTacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1120 AA 
Protein Sequence
MGDQQLYKTN HVAHGGENLF YQQPPLGVHS GLNHSYGNTI SGAGMDAPQA SPISPHFPQD 60
TRDGLSLPIG SKNLGQMDAS RQGGWGSHAG PGSHVQLRSN LANSNMMWGA PAQVEPTDGY 120
QYTYSQASEI RTQKLTSGVL HKLDSFTQVF ANQNLRIQVN NMAQVLHTQS AVMDGASDSA 180
LRQLLSQKPV EPSASAIASR YQQVPQQPHP GFTGGLPKPA LPVGQHAPQG HLYYDYQQPL 240
AQMSVQGGQP LQAPQVLSSH MQPLQQHQYY PQPPPQQQQA GLQRLSVQEM QQQQQQQIRP 300
SPPQQQQQQQ QQQQQQQLQL QQRQSSLQIP QYYQPQPMMQ HLQEQQQPSM HLQPPSYHRD 360
PHQYTPEQAH AVQLIQLGSM PQYYYQEPQQ PYGHPLYQQS HLSQHLQRED SQLKTYSSDR 420
QTPALLSSHG DMGPSDTGVA DPASSEMTRV TSTLPHQPLL SPSGIHLNSM GSQHQQPSPS 480
AMWPQMHLPD GRAQPGSPES SGQTKGVFGE QFDAKNKLTC SICLKEFKSL PALNGHMRSH 540
GGMRASPSLK QEIPRKHPPI TAKVEEPLKT PPEKKKFRHR PEPLFIPPPP SSYTPNPTSY 600
SGATLYQSQL RSPRILGDHL LLDPAHELPP YTPPPMLSPV RQGSGLFSNV LISGHGPGVH 660
PQLPLTPLTP TPRVLLCRSS SIDGSNVTVT PGPGEQTVDV EPRINIGLRF QAEIPELQDV 720
SAMAQDTHKA TLVWKPWPEL ENQALQQQVE NLLNLCCSSA LPGGGTNSEF ALHSLFEAKG 780
DVMATLETLL LRKPVRLKCH PLANYHYAGS DKWTSLERKL FNKALATYSK DFIFVQKMVK 840
SKTVAQCVEY YYTWKKIMRL GRKHRTRLAE IIDDCMTSEE EEDAEEEEED PEEDRKSIKD 900
EESEVPKTPE PPPAPALAPT EGAPMQAGGQ PSGSFICEMP NCGAVFSSRQ ALNGHARIHG 960
GTNQVAKTRG AVPSGKQKPG GTQSGYCSVK SSPSHSTTSG ETDPTTIFPC KECGKVFFKI 1020
KSRNAHMKTH RQQEEQQRQK AQKAAFAAEM AATIERTTGP VGAPELLPLD QLSLMKPKDV 1080
DILDDDMVQQ LGVMDEAEVV GTDLLLDNQD SVLLQGDTEL 1120 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0003682; F:chromatin binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:Compara.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:Compara. 
Interpro
 IPR000949; ELM2_dom.
 IPR009057; Homeodomain-like.
 IPR001005; SANT/Myb.
 IPR017884; SANT_dom.
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like. 
Pfam
 PF01448; ELM2 
SMART
 SM00717; SANT
 SM00355; ZnF_C2H2 
PROSITE
 PS51156; ELM2
 PS51293; SANT
 PS00028; ZINC_FINGER_C2H2_1
 PS50157; ZINC_FINGER_C2H2_2 
PRINTS