CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003627
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nucleoid occlusion factor SlmA 
Protein Synonyms/Alias
 Protein Ttk; Synthetically lethal with a defective Min system protein A 
Gene Name
 slmA 
Gene Synonyms/Alias
 ttk; yicB; b3641; JW5641 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
79TRINLILKDEKDTTAacetylation[1]
82NLILKDEKDTTARLRacetylation[1]
179RFVRSEFKYRPTDDFacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. 
Sequence Annotation
 DOMAIN 10 70 HTH tetR-type.
 DNA_BIND 33 52 H-T-H motif (By similarity).  
Keyword
 3D-structure; Cell cycle; Cell division; Coiled coil; Complete proteome; Cytoplasm; DNA-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 198 AA 
Protein Sequence
MAEKQTAKRN RREEILQSLA LMLESSDGSQ RITTAKLAAS VGVSEAALYR HFPSKTRMFD 60
SLIEFIEDSL ITRINLILKD EKDTTARLRL IVLLLLGFGE RNPGLTRILT GHALMFEQDR 120
LQGRINQLFE RIEAQLRQVL REKRMREGEG YTTDETLLAS QILAFCEGML SRFVRSEFKY 180
RPTDDFDARW PLIAAQLQ 198 
Gene Ontology
 GO:0043590; C:bacterial nucleoid; IDA:EcoCyc.
 GO:0005737; C:cytoplasm; IEA:HAMAP.
 GO:0043565; F:sequence-specific DNA binding; IDA:EcoCyc.
 GO:0000918; P:barrier septum site selection; IMP:EcoliWiki.
 GO:0010974; P:negative regulation of barrier septum assembly; IDA:EcoliWiki.
 GO:0032272; P:negative regulation of protein polymerization; IDA:EcoCyc.
 GO:0043547; P:positive regulation of GTPase activity; IDA:EcoliWiki. 
Interpro
 IPR023772; DNA-bd_HTH_TetR-type_CS.
 IPR009057; Homeodomain-like.
 IPR001647; HTH_TetR.
 IPR023769; NO_SlmA.
 IPR015893; Tet_transcr_reg_TetR-like_C.
 IPR011075; Tet_transcr_reg_TetR-rel_C. 
Pfam
 PF00440; TetR_N 
SMART
  
PROSITE
 PS01081; HTH_TETR_1
 PS50977; HTH_TETR_2 
PRINTS