CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014465
UniProt Accession
Genbank Protein ID
 U39549 
Genbank Nucleotide ID
Protein Name
 Synaptogyrin-1 
Protein Synonyms/Alias
 p29 
Gene Name
 Syngr1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
10GGAYGAGKAGGAFDPubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
 Involved in the regulation of short-term and long-term synaptic plasticity (By similarity). 
Sequence Annotation
 DOMAIN 20 173 MARVEL.
 MOD_RES 1 1 N-acetylmethionine (By similarity).  
Keyword
 Acetylation; Cell junction; Complete proteome; Membrane; Reference proteome; Synapse; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 234 AA 
Protein Sequence
MEGGAYGAGK AGGAFDPYTL VRQPHTILRV VSWVFSIVVF GSIVNEGYLN NPEEEEEFCI 60
YNRNPNACSY GVTVGVLAFL TCLVYLALDV YFPQISSVKD RKKAVLSDIG VSAFWAFFWF 120
VGFCFLANQW QVSKPKDNPL NEGTDAARAA IAFSFFSIFT WAGQAVLAFQ RYQIGADSAL 180
FSQDYMDPSQ DSSMPYAPYV EPSAGSDPTG MGGTYQHPAN AFDAEPQGYQ SQGY 234 
Gene Ontology
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.
 GO:0030672; C:synaptic vesicle membrane; IDA:RGD.
 GO:0006605; P:protein targeting; IDA:MGI.
 GO:0048169; P:regulation of long-term neuronal synaptic plasticity; IEA:Compara.
 GO:0048172; P:regulation of short-term neuronal synaptic plasticity; IEA:Compara. 
Interpro
 IPR008253; Marvel.
 IPR021128; MARVEL-like_dom.
 IPR016579; Synaptogyrin. 
Pfam
 PF01284; MARVEL 
SMART
  
PROSITE
 PS51225; MARVEL 
PRINTS