CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043432
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Zinc finger protein 598 
Protein Synonyms/Alias
  
Gene Name
 ZNF598 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
25RQVVFGKKLPAFATIubiquitination[1]
135HRGHPLCKFCDERYLubiquitination[1]
149LDNDELLKHLRRDHYubiquitination[1, 2]
183LREHFREKHFLCEEGubiquitination[1]
208FRTEIDLKAHRTACHubiquitination[3]
282RRGSWRYKREEEDREubiquitination[4]
795TKSKKNKKSAWQATTubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 849 AA 
Protein Sequence
MRVLCEQRYC AVCREELRQV VFGKKLPAFA TIPIHQLQHE KKYDIYFADG KVYALYRQLL 60
QHECPRCPEL PPFSLFGDLE QHMRRQHELF CCRLCLQHLQ IFTYERKWYS RKDLARHRMQ 120
GDPDDTSHRG HPLCKFCDER YLDNDELLKH LRRDHYFCHF CDSDGAQDYY SDYAYLREHF 180
REKHFLCEEG RCSTEQFTHA FRTEIDLKAH RTACHSRSRA EARQNRHIDL QFSYAPRHSR 240
RNEGVVGGED YEEVDRYSRQ GRVARAGTRG AQQSRRGSWR YKREEEDREV AAAVRASVAA 300
QQQEEARRSE DQEEGGRPKK EEAAARGPED PRGPRRSPRT QGEGPGPKET STNGPVSQEA 360
FSVTGPAAPG CVGVPGALPP PSPKLKDEDF PSLSASTSSS CSTAATPGPV GLALPYAIPA 420
RGRSAFQEED FPALVSSVPK PGTAPTSLVS AWNSSSSSKK VAQPPLSAQA TGSGQPTRKA 480
GKGSRGGRKG GPPFTQEEEE DGGPALQELL STRPTGSVSS TLGLASIQPS KVGKKKKVGS 540
EKPGTTLPQP PPATCPPGAL QAPEAPASRA EGPVAVVVNG HMEGPAPARS APKEPPGLPR 600
PLGSFPCPTP QEDFPALGGP CPPRMPPPPG FSAVVLLKGT PPPPPPGLVP PISKPPPGFS 660
GLLPSPHPAC VPSPATTTTT KAPRLLPAPR AYLVPENFRE RNLQLIQSIR DFLQSDEARF 720
SEFKSHSGEF RQGLISAAQY YKSCRDLLGE NFQKVFNELL VLLPDTAKQQ ELLSAHTDFC 780
NREKPLSTKS KKNKKSAWQA TTQQAGLDCR VCPTCQQVLA HGDASSHQAL HAARDDDFPS 840
LQAIARIIT 849 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like. 
Pfam
  
SMART
 SM00355; ZnF_C2H2 
PROSITE
 PS00028; ZINC_FINGER_C2H2_1 
PRINTS