CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003605
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Single-stranded DNA-binding protein 
Protein Synonyms/Alias
 SSB; Helix-destabilizing protein 
Gene Name
 ssb 
Gene Synonyms/Alias
 exrB; lexC; b4059; JW4020 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
8MASRGVNKVILVGNLacetylation[1]
44TSESWRDKATGEMKEacetylation[1, 2]
50DKATGEMKEQTEWHRacetylation[1, 2]
63HRVVLFGKLAEVASEacetylation[1, 2, 3, 4]
74VASEYLRKGSQVYIEacetylation[1]
88EGQLRTRKWTDQSGQacetylation[1, 2]
Reference
 [1] The role of the 6 lysines and the terminal amine of Escherichia coli single-strand binding protein in its binding of single-stranded DNA.
 Chen J, Smith DL, Griep MA.
 Protein Sci. 1998 Aug;7(8):1781-8. [PMID: 10082375]
 [2] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [3] The diversity of lysine-acetylated proteins in Escherichia coli.
 Yu BJ, Kim JA, Moon JH, Ryu SE, Pan JG.
 J Microbiol Biotechnol. 2008 Sep;18(9):1529-36. [PMID: 18852508]
 [4] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 This protein is essential for replication of the chromosomes and its single-stranded DNA phages. It is also involved in DNA recombination and repair. 
Sequence Annotation
 DOMAIN 6 111 SSB.
 DNA_BIND 55 61  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; DNA damage; DNA repair; DNA replication; DNA-binding; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 178 AA 
Protein Sequence
MASRGVNKVI LVGNLGQDPE VRYMPNGGAV ANITLATSES WRDKATGEMK EQTEWHRVVL 60
FGKLAEVASE YLRKGSQVYI EGQLRTRKWT DQSGQDRYTT EVVVNVGGTM QMLGGRQGGG 120
APAGGNIGGG QPQGGWGQPQ QPQGGNQFSG GAQSRPQQSA PAAPSNEPPM DFDDDIPF 178 
Gene Ontology
 GO:0003697; F:single-stranded DNA binding; IDA:EcoCyc.
 GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
 GO:0006298; P:mismatch repair; TAS:EcoCyc.
 GO:0000725; P:recombinational repair; TAS:EcoCyc.
 GO:0009432; P:SOS response; TAS:EcoCyc. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR000424; Primosome_PriB/ssb.
 IPR011344; ssDNA-bd. 
Pfam
 PF00436; SSB 
SMART
  
PROSITE
 PS50935; SSB 
PRINTS