CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004922
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
 AAA36406.1; AAB59449.1; AAB59449.1; AAB59449.1; AAB59449.1; AAB59449.1; AAB59449.1; AAB59449.1; AAB59449.1; AAB59449.1; AAA19581.1; AAA19582.1; AAA19583.1; AAA19584.1; AAA19586.1; AAC72077.1; AAC72078.1; AAC72079.1; AAC72080.1; AAC72081.1; AAC72082.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83662.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83663.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83664.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83665.1; AAC83666.1; AAC83666.1; AAC83666.1; AAC83666.1; AAC83666.1; AAC83666.1; AAC83666.1; AAF36538.1 
Protein Name
 Cyclin-dependent kinase 11B 
Protein Synonyms/Alias
 Cell division cycle 2-like protein kinase 1; CLK-1; Cell division protein kinase 11B; Galactosyltransferase-associated protein kinase p58/GTA; PITSLRE serine/threonine-protein kinase CDC2L1; p58 CLK-1 
Gene Name
 CDK11B 
Gene Synonyms/Alias
 CDC2L1; CDK11; PITSLREA; PK58 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
294NYVEHDLKSLMETMKubiquitination[1]
301KSLMETMKQPFLPGEubiquitination[1]
430DLGTPSEKIWPGYSEubiquitination[1]
442YSELPAVKKMTFSEHubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Appears to play multiple roles in cell cycle progression, cytokinesis and apoptosis. The p110 isoforms have been suggested to be involved in pre-mRNA splicing, potentially by phosphorylating the splicing protein SFRS7. The p58 isoform may act as a negative regulator of normal cell cycle progression. 
Sequence Annotation
 DOMAIN 438 723 Protein kinase.
 NP_BIND 444 452 ATP (By similarity).
 ACT_SITE 562 562 Proton acceptor (By similarity).
 BINDING 467 467 ATP (By similarity).
 MOD_RES 47 47 Phosphoserine (By similarity).
 MOD_RES 115 115 Phosphoserine.
 MOD_RES 277 277 Phosphoserine (By similarity).
 MOD_RES 283 283 Phosphoserine (By similarity).
 MOD_RES 482 482 Phosphoserine; by CDK7.
 MOD_RES 488 488 Phosphothreonine; by CDK7.
 MOD_RES 589 589 Phosphoserine.
 MOD_RES 594 594 Phosphotyrosine.
 MOD_RES 595 595 Phosphothreonine.
 MOD_RES 751 751 Phosphothreonine (By similarity).
 MOD_RES 752 752 Phosphoserine (By similarity).  
Keyword
 Alternative initiation; Alternative splicing; Apoptosis; ATP-binding; Cell cycle; Complete proteome; Cytoplasm; Kinase; Nucleotide-binding; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Serine/threonine-protein kinase; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 795 AA 
Protein Sequence
MREDYSDKVK ASHWSRSPPR PPRERFELGD GRKPVKEEKM EERDLLSDLQ DISDSERKTS 60
SAESSSAESG SGSEEEEEEE EEEEEEGSTS EESEEEEEEE EEEEEETGSN SEEASEQSAE 120
EVSEEEMSED EERENENHLL VVPESRFDRD SGESEEAEEE VGEGTPQSSA LTEGDYVPDS 180
PALSPIELKQ ELPKYLPALQ GCRSVEEFQC LNRIEEGTYG VVYRAKDKKT DEIVALKRLK 240
MEKEKEGFPI TSLREINTIL KAQHPNIVTV REIVVGSNMD KIYIVMNYVE HDLKSLMETM 300
KQPFLPGEVK TLMIQLLRGV KHLHDNWILH RDLKTSNLLL SHAGILKVGD FGLAREYGSP 360
LKAYTPVVVT LWYRAPELLL GAKEYSTAVD MWSVGCIFGE LLTQKPLFPG KSEIDQINKV 420
FKDLGTPSEK IWPGYSELPA VKKMTFSEHP YNNLRKRFGA LLSDQGFDLM NKFLTYFPGR 480
RISAEDGLKH EYFRETPLPI DPSMFPTWPA KSEQQRVKRG TSPRPPEGGL GYSQLGDDDL 540
KETGFHLTTT NQGASAAGPG FSLKF 565 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0005524; F:ATP binding; IDA:UniProtKB.
 GO:0004693; F:cyclin-dependent protein serine/threonine kinase activity; IEA:EC.
 GO:0004674; F:protein serine/threonine kinase activity; IDA:UniProtKB.
 GO:0006915; P:apoptotic process; NAS:UniProtKB.
 GO:0008283; P:cell proliferation; TAS:ProtInc.
 GO:0007067; P:mitosis; NAS:UniProtKB.
 GO:0001558; P:regulation of cell growth; IEP:UniProtKB.
 GO:0050684; P:regulation of mRNA processing; IDA:UniProtKB.
 GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB. 
Interpro
 IPR011009; Kinase-like_dom.
 IPR000719; Prot_kinase_cat_dom.
 IPR002290; Ser/Thr_dual-sp_kinase_dom.
 IPR008271; Ser/Thr_kinase_AS. 
Pfam
 PF00069; Pkinase 
SMART
 SM00220; S_TKc 
PROSITE
 PS00107; PROTEIN_KINASE_ATP
 PS50011; PROTEIN_KINASE_DOM
 PS00108; PROTEIN_KINASE_ST 
PRINTS