CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015051
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonuclease PH 
Protein Synonyms/Alias
 RNase PH; tRNA nucleotidyltransferase 
Gene Name
 rph 
Gene Synonyms/Alias
 RPA0329 
Created Date
 July 27, 2013 
Organism
 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) 
NCBI Taxa ID
 258594 
Lysine Modification
Position
Peptide
Type
References
52ERLPPWLKGQGRGWVacetylation[1]
Reference
 [1] System-wide studies of N-lysine acetylation in Rhodopseudomonas palustris reveal substrate specificity of protein acetyltransferases.
 Crosby HA, Pelletier DA, Hurst GB, Escalante-Semerena JC.
 J Biol Chem. 2012 May 4;287(19):15590-601. [PMID: 22416131
Functional Description
 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Nucleotidyltransferase; Transferase; tRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 237 AA 
Protein Sequence
MRPSRRAPDE LRAVSLERGV VKYAEGSCLV KFGDTHVLVT ATLEERLPPW LKGQGRGWVT 60
AEYGMLPRAT LERTRREASA GKQNGRTVEI QRLIGRSLRT IVDLEALGER QITVDCDVLQ 120
ADGGTRTASI TGAWVALADC LNWMKARNMI KGQVLRDNVA AISCGIYNGT PVLDLDYAED 180
SEAETDANFV MTGDGRLVEV QGTAERTPFS QDEFLQLMAL AQKGVARLVD LQKMAVG 237 
Gene Ontology
 GO:0000049; F:tRNA binding; IEA:InterPro.
 GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.
 GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
 GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. 
Interpro
 IPR001247; ExoRNase_PH_dom1.
 IPR015847; ExoRNase_PH_dom2.
 IPR027408; PNPase/RNase_PH_dom.
 IPR020568; Ribosomal_S5_D2-typ_fold.
 IPR002381; RNase_PH_bac-type.
 IPR018336; RNase_PH_CS. 
Pfam
 PF01138; RNase_PH
 PF03725; RNase_PH_C 
SMART
  
PROSITE
 PS01277; RIBONUCLEASE_PH 
PRINTS