CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-040438
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Pcdh1 
Protein Synonyms/Alias
  
Gene Name
 Pcdh1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
739TKDLYAPKPSGKAAKubiquitination[1]
762SKSPKPVKPVEDEDDubiquitination[1]
774EDDTGLQKSLKFNLMubiquitination[1]
777TGLQKSLKFNLMSDAubiquitination[1]
828PQSPSASKKHQVVQDubiquitination[1]
990RTKSSALKLSTFVPYubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Calcium; Cell adhesion; Complete proteome; Membrane; Reference proteome; Repeat; Transmembrane. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1077 AA 
Protein Sequence
NDNTPNFASP VITLAIPENT NIGSLFPIPL ATDRDAGPNG VASYELQAGP EAQELFGLQV 60
AEDQEEKQPQ LIVMGNLDRE RWDSYDLTIK VQDGGNPPRA SSALLRVTVL DTNDNAPKFE 120
RPTYEAELSE NSPIGHSVIQ VKANDSDQGA NAEIDYTFHQ APEVVRRLLR LDRNTGLITV 180
QGPVDREDLS TLRFSVLAKD RGATPKSARA QVVVTVKDMN DNAPTIEIRG IGLVTHQDGM 240
ANISEDVAEE TAVALVQVSD RDEGENAAVT CVVAGDVPFQ LRQASETGSD SKKKYFLQTT 300
TPLDYEKVKD YTIEIVAVDS GNPPLSSTNS LKVQVVDVND NAPVFTQSIT EVAFPENNKP 360
GEVVAEVTAS DADSGSNAEL VYSLEPEPAA QGLFTISPEN GEIRVKTSLD REQRDSYELK 420
VVAADRGSPS LQGTATVLVN VLDCNDNDPK FMLSGYNFSV MENMPALSPV GMVTVIDGDK 480
GENARVQLSV EQDNGDFVIQ NGTGTILSSL SFDREQQSTY TFQLKAVDGG VPPRSAYVGV 540
TINVLDENDN APFITAPSNT SHRLLTPQTR LGETVSQVTA EDIDSGINAE LTYSIAGGNP 600
YGLFQIGSHS GAITLEKEIE RRHHGLHRLV VKVSDRGKPP RYGTALVHLY VNETLANRTL 660
LETLLVHSLD TPLDIDIAGD PEYERSKQRG NILFGVVAGV VAVALLIALA VLVRYCRQRE 720
AKSGYQAGKK ETKDLYAPKP SGKAAKGSKS KGKKSKSPKP VKPVEDEDDT GLQKSLKFNL 780
MSDAPGDSPR IHLPLNYPPG SPDLGRHYRS NSPLPSIQLQ PQSPSASKKH QVVQDLPPAN 840
TFVGTGDTTS TGSEQYSDYS YRTNPPKYPS KQLPHRRVTF SATSQAQELQ DPSQHSYYDS 900
GLEESETPSS KSSSGPRLGP LALPEDHYER TTPDGSIGEM EHPENDLRPL PDVAMTGTCT 960
RECSEFGHSD TCWMPGQSSP SRRTKSSALK LSTFVPYQDR GGQEPAGAGS PSPPEDRNTK 1020
TAPVRLLPSY SAFSHSSHDS CKDSATLEEI PLTQTSDFPP TATPASAQTA AKREIYL 1077 
Gene Ontology
 GO:0005911; C:cell-cell junction; TAS:MGI.
 GO:0005887; C:integral to plasma membrane; TAS:MGI.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0016339; P:calcium-dependent cell-cell adhesion; TAS:MGI.
 GO:0007156; P:homophilic cell adhesion; TAS:MGI. 
Interpro
 IPR002126; Cadherin.
 IPR015919; Cadherin-like.
 IPR020894; Cadherin_CS.
 IPR013585; Protocadherin. 
Pfam
 PF00028; Cadherin
 PF08374; Protocadherin 
SMART
 SM00112; CA 
PROSITE
 PS00232; CADHERIN_1
 PS50268; CADHERIN_2 
PRINTS
 PR00205; CADHERIN.