CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002849
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ATP-dependent DNA helicase rep 
Protein Synonyms/Alias
  
Gene Name
 rep 
Gene Synonyms/Alias
 b3778; JW5604 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
269SQDFPALKVIKLEQNacetylation[1]
360HQSRVFEKFLMQNRIacetylation[1]
384FFSRPEIKDLLAYLRacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. 
Sequence Annotation
 DOMAIN 1 280 UvrD-like helicase ATP-binding.
 DOMAIN 281 562 UvrD-like helicase C-terminal.
 NP_BIND 25 30 ATP (By similarity).
 BINDING 278 278 ATP (By similarity).  
Keyword
 3D-structure; ATP-binding; Complete proteome; DNA replication; DNA-binding; Helicase; Hydrolase; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 673 AA 
Protein Sequence
MRLNPGQQQA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA 60
REMKERVGQT LGRKEARGLM ISTFHTLGLD IIKREYAALG MKANFSLFDD TDQLALLKEL 120
TEGLIEDDKV LLQQLISTIS NWKNDLKTPS QAAASAIGER DRIFAHCYGL YDAHLKACNV 180
LDFDDLILLP TLLLQRNEEV RKRWQNKIRY LLVDEYQDTN TSQYELVKLL VGSRARFTVV 240
GDDDQSIYSW RGARPQNLVL LSQDFPALKV IKLEQNYRSS GRILKAANIL IANNPHVFEK 300
RLFSELGYGA ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKDYAILYR GNHQSRVFEK 360
FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLKK 420
LGEWAMTRNK SMFTASFDMG LSQTLSGRGY EALTRFTHWL AEIQRLAERE PIAAVRDLIH 480
GMDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM 540
ERGESEEELD QVQLMTLHAS KGLEFPYVYM VGMEEGFLPH QSSIDEDNID EERRLAYVGI 600
TRAQKELTFT LCKERRQYGE LVRPEPSRFL LELPQDDLIW EQERKVVSAE ERMQKGQSHL 660
ANLKAMMAAK RGK 673 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:InterPro.
 GO:0005524; F:ATP binding; IDA:EcoCyc.
 GO:0004003; F:ATP-dependent DNA helicase activity; IDA:EcoCyc.
 GO:0003677; F:DNA binding; IDA:EcoCyc.
 GO:0006268; P:DNA unwinding involved in replication; IDA:EcoCyc. 
Interpro
 IPR013986; DExx_box_DNA_helicase_dom.
 IPR005752; DNA_helicase_ATP-dep_RepA.
 IPR014017; DNA_helicase_UvrD-like_C.
 IPR000212; DNA_helicase_UvrD/REP.
 IPR027417; P-loop_NTPase.
 IPR014016; UvrD-like_ATP-bd. 
Pfam
 PF00580; UvrD-helicase
 PF13361; UvrD_C 
SMART
  
PROSITE
 PS51198; UVRD_HELICASE_ATP_BIND
 PS51217; UVRD_HELICASE_CTER 
PRINTS