CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042379
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Nuclear autoantigen Sp-100 
Protein Synonyms/Alias
  
Gene Name
 SP100 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
84NICEVCNKWGRLFCCubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 259 AA 
Protein Sequence
XTLYKERFKQ GTSKKCIQSE DKKWFTPREF EIEGDRGASK NWKLSIRCGG YTLKVLMERI 60
LESHNNTLVD PCPENSNICE VCNKWGRLFC CDTCPRSFHE HCHIPSVEAN KNPWSCIFCR 120
IKTIQERCPE SQSGHQESEV LMRQMLPEEQ LKCEFLLLKV YCDSKSCFFA SEPYYNREGS 180
QGPQKPMWLN KVKTSLNEQM YTRVEGFVQD MRLIFHNHKE FYREDKFTRL GIQVQDIFEK 240
NFRNIFAIQE TSKNIIMFI 259 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR001487; Bromodomain.
 IPR000770; SAND_dom.
 IPR010919; SAND_dom-like.
 IPR019786; Zinc_finger_PHD-type_CS.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF00439; Bromodomain
 PF00628; PHD
 PF01342; SAND 
SMART
 SM00297; BROMO
 SM00249; PHD
 SM00258; SAND 
PROSITE
 PS50864; SAND
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2 
PRINTS