CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010171
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable 2-keto-3-deoxy-galactonate aldolase YagE 
Protein Synonyms/Alias
 Probable KDGal aldolase YagE 
Gene Name
 yagE 
Gene Synonyms/Alias
 b0268; JW0261 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
167RSNIIGIKDTIDSVAacetylation[1, 2]
289SPLDEPRKAQLKTLLacetylation[1]
293EPRKAQLKTLLQQLKacetylation[1]
300KTLLQQLKLC*****acetylation[1]
Reference
 [1] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [2] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the formation of 2-keto-3-deoxy-galactonate (KDGal) from pyruvate and glyceraldehyde. Overexpression leads to increased growth (over 2 hours) in the presence of the antibiotics norfloxacin, ampicillin and streptomycin. 
Sequence Annotation
 ACT_SITE 49 49 Charge relay system (Probable).
 ACT_SITE 112 112 Charge relay system (Probable).
 ACT_SITE 138 138 Proton donor (Probable).
 ACT_SITE 167 167 Schiff-base intermediate with substrate.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Lyase; Reference proteome; Schiff base. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 302 AA 
Protein Sequence
MPQSALFTGI IPPVSTIFTA DGQLDKPGTA ALIDDLIKAG VDGLFFLGSG GEFSQLGAEE 60
RKAIARFAID HVDRRVPVLI GTGGTNARET IELSQHAQQA GADGIVVINP YYWKVSEANL 120
IRYFEQVADS VTLPVMLYNF PALTGQDLTP ALVKTLADSR SNIIGIKDTI DSVAHLRSMI 180
HTVKGAHPHF TVLCGYDDHL FNTLLLGGDG AISASGNFAP QVSVNLLKAW RDGDVAKAAG 240
YHQTLLQIPQ MYQLDTPFVN VIKEAIVLCG RPVSTHVLPP ASPLDEPRKA QLKTLLQQLK 300
LC 302 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0042802; F:identical protein binding; IDA:EcoCyc.
 GO:0016829; F:lyase activity; IEA:UniProtKB-KW. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR002220; Dihydrodipicolinate_synth-like.
 IPR020625; Dihydrodipicolinate_synth_AS.
 IPR020624; Dihydrodipicolinate_synth_CS. 
Pfam
 PF00701; DHDPS 
SMART
  
PROSITE
 PS00665; DHDPS_1
 PS00666; DHDPS_2 
PRINTS
 PR00146; DHPICSNTHASE.