CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002871
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 SsrA-binding protein 
Protein Synonyms/Alias
  
Gene Name
 smpB 
Gene Synonyms/Alias
 smqB; STM2688 
Created Date
 July 27, 2013 
Organism
 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) 
NCBI Taxa ID
 99287 
Lysine Modification
Position
Peptide
Type
References
4****MTKKKAHKPGSacetylation[1]
5***MTKKKAHKPGSAacetylation[1]
8MTKKKAHKPGSATIAacetylation[1]
Reference
 [1] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786
Functional Description
 Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Cytoplasm; Reference proteome; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 160 AA 
Protein Sequence
MTKKKAHKPG SATIALNKRA RHEYFIEEEF EAGLALQGWE VKSLRAGKAN IGDSYVILKD 60
GEAWLFGANF TPMAVASTHV VCDPTRTRKL LLNQRELDSL YGRINREGYT VVALSLYWKN 120
AWCKVKIGVA KGKKQHDKRS DLKEREWQLD KARIMKNAGR 160 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW. 
Interpro
 IPR023620; SmpB.
 IPR000037; SsrA-bd_prot.
 IPR020081; SsrA-bd_prot_CS. 
Pfam
 PF01668; SmpB 
SMART
  
PROSITE
 PS01317; SSRP 
PRINTS