CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011848
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Chromatin modification-related protein EAF3 
Protein Synonyms/Alias
 ESA1-associated factor 3 
Gene Name
 EAF3 
Gene Synonyms/Alias
 YPR023C; YP9367.03C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
45YTSIPNDKPGGSSQAacetylation[1]
54GGSSQATKEIKPQKLacetylation[1]
156RSNASISKSTSQSFLacetylation[1, 2]
Reference
 [1] mChIP-KAT-MS, a method to map protein interactions and acetylation sites for lysine acetyltransferases.
 Mitchell L, Huard S, Cotrut M, Pourhanifeh-Lemeri R, Steunou AL, Hamza A, Lambert JP, Zhou H, Ning Z, Basu A, Côté J, Figeys DA, Baetz K.
 Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):E1641-50. [PMID: 23572591]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair. 
Sequence Annotation
 DOMAIN 216 399 MRG.
 MOD_RES 201 201 Phosphoserine.  
Keyword
 3D-structure; Chromatin regulator; Complete proteome; Direct protein sequencing; DNA damage; DNA repair; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 401 AA 
Protein Sequence
MVDLEQEFAL GGRCLAFHGP LMYEAKILKI WDPSSKMYTS IPNDKPGGSS QATKEIKPQK 60
LGEDESIPEE IINGKCFFIH YQGWKSSWDE WVGYDRIRAY NEENIAMKKR LANEAKEAKK 120
SLLEQQKKKK LSTSLGGPSN GGKRKGDSRS NASISKSTSQ SFLTSSVSGR KSGRSSANSL 180
HPGSSLRSSS DQNGNDDRRR SSSLSPNMLH HIAGYPTPKI SLQIPIKLKS VLVDDWEYVT 240
KDKKICRLPA DVTVEMVLNK YEHEVSQELE SPGSQSQLSE YCAGLKLYFD KCLGNMLLYR 300
LERLQYDELL KKSSKDQKPL VPIRIYGAIH LLRLISVLPE LISSTTMDLQ SCQLLIKQTE 360
DFLVWLLMHV DEYFNDKDPN RSDDALYVNT SSQYEGVALG M 401 
Gene Ontology
 GO:0035267; C:NuA4 histone acetyltransferase complex; IPI:SGD.
 GO:0033698; C:Rpd3L complex; IDA:SGD.
 GO:0032221; C:Rpd3S complex; IDA:SGD.
 GO:0004402; F:histone acetyltransferase activity; IDA:SGD.
 GO:0006281; P:DNA repair; IDA:SGD.
 GO:0016575; P:histone deacetylation; IMP:SGD.
 GO:0060195; P:negative regulation of antisense RNA transcription; IMP:SGD.
 GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:SGD.
 GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
 GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD. 
Interpro
 IPR000953; Chromo_domain/shadow.
 IPR016197; Chromodomain-like.
 IPR008676; MRG.
 IPR026541; MRG_dom.
 IPR025995; Tudor-knot. 
Pfam
 PF05712; MRG
 PF11717; Tudor-knot 
SMART
 SM00298; CHROMO 
PROSITE
 PS51640; MRG 
PRINTS