CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006615
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transcription initiation factor IIE subunit beta 
Protein Synonyms/Alias
 TFIIE-beta; Factor A 43 kDa subunit; Transcription factor A small subunit 
Gene Name
 TFA2 
Gene Synonyms/Alias
 YKR062W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
3*****MSKNRDPLLAacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (By similarity). 
Sequence Annotation
 DNA_BIND 113 187 TFIIE beta.
 MOD_RES 97 97 Phosphoserine.
 MOD_RES 106 106 Phosphoserine.  
Keyword
 Complete proteome; Direct protein sequencing; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 328 AA 
Protein Sequence
MSKNRDPLLA NLNAFKSKVK SAPVIAPAKV GQKKTNDTVI TIDGNTRKRT ASERAQENTL 60
NSAKNPVLVD IKKEAGSNSS NAISLDDDDD DEDFGSSPSK KVRPGSIAAA ALQANQTDIS 120
KSHDSSKLLW ATEYIQKKGK PVLVNELLDY LSMKKDDKVI ELLKKLDRIE FDPKKGTFKY 180
LSTYDVHSPS ELLKLLRSQV TFKGISCKDL KDGWPQCDET INQLEEDSKI LVLRTKKDKT 240
PRYVWYNSGG NLKCIDEEFV KMWENVQLPQ FAELPRKLQD LGLKPASVDP ATIKRQTKRV 300
EVKKKRQRKG KITNTHMTGI LKDYSHRV 328 
Gene Ontology
 GO:0005673; C:transcription factor TFIIE complex; IDA:SGD.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006366; P:transcription from RNA polymerase II promoter; IDA:SGD.
 GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro. 
Interpro
 IPR016656; TFIIE-bsu.
 IPR003166; TFIIE_bsu_DNA-bd. 
Pfam
 PF02186; TFIIE_beta 
SMART
  
PROSITE
 PS51351; TFIIE_BETA_C 
PRINTS