CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039092
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein RGD1562997 
Protein Synonyms/Alias
  
Gene Name
 Taf4b 
Gene Synonyms/Alias
 RGD1562997 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
664KRILDIGKKHDITELacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 802 AA 
Protein Sequence
MPAGLTGPAG AAAPVVSSAS GTVTMAPVAA LPVRVESTPV ALCPVTKAPV NVCVDSVAPQ 60
SLPAPVGTLV TKVVPVTALP KLGGPRLPAP QIVTVKTPST TTIQLPANLQ LPPGTVLIKS 120
NSGQLMLVSP QQAVAGTKTT STITPRPAVP ANTQTVKICT VPNSSSQLMK KVTVAPVKSL 180
TQIGTTVATT ASSASSGQPV TVPSNVVTVT PAKPVNNVSI LKSSSLGILS TPSNDSSLKA 240
ETSVSAQTSL PPTVLENVKK CKNFLSMLIK LACSGSQSPE MGQNVKKLVE QLLDAEIEAE 300
EFTRKLYIEL KSAPQPHLVP FLKKSVVALR QLLPNSQSFT ENCVQEVSGD VVIPSCAMTT 360
ATSPAVTSTV SPVIVSGAAV PRTLSVQQTL NSLAGPGGAN TGVVTLHSVT PATATGGTTA 420
TTVLLQTPKP LTTPVPNTVA AVSLQPENPV VSGAAVALAV PSATLGEASA QALCLPSVKT 480
AITSAGTKAE KAAISTPVQI TLAQPGPLLP QSAGIPQAGK AKQLIVQQPS VGNANHVISI 540
SHSSPLSSQT CGQKAPVTAV MPTGKFPPSS IIKQISLPGN KLLSLQAQTT SIQNNKIKEN 600
GPACFRGEDD INDVTCMAEV NLDEENACIL ATHSDFVGKL IQSCKDEPFL LIGALQKRIL 660
DIGKKHDITE LNSDAVNLIS HATQERLRGL LEKLTAIAQH RMTIYKGSEN YILSTDTRSQ 720
LKFLEKLDQL EKQRKDLEER EMLLKAAKSR SNKEDPEQLR LKQKAKELQQ LELAQIQYRD 780
ANLTALAAIG PRKKRPLESG NE 802 
Gene Ontology
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:Compara.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007900; TAF4.
 IPR003894; TAFH_NHR1. 
Pfam
 PF05236; TAF4
 PF07531; TAFH 
SMART
  
PROSITE
 PS51119; TAFH 
PRINTS