CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039909
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 RRP12-like protein 
Protein Synonyms/Alias
  
Gene Name
 RRP12 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
229QAHPVMRKCLQSLCDubiquitination[1]
315LPLANTLKSKAMDLAubiquitination[2]
317LANTLKSKAMDLAQAubiquitination[1, 2]
389ALRTLITKGCQAEADubiquitination[1, 2]
405AEVSRFAKNFLPILFubiquitination[2]
453LVNSLLEKASEKVLDubiquitination[1]
457LLEKASEKVLDPASSubiquitination[1]
537SHLEDLKKTLLDSLRubiquitination[1]
556PAKRPRLKCLLHIVRubiquitination[1]
828QRSRAWLKEGGGDEPubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1015 AA 
Protein Sequence
MDIMSAQASS GSTSVLRWVL SCLATLLRKQ DLEAWGYPVT LQVYHGLLSF TVHPKPKLVT 60
ACAMQAFHSL FHARPGLSTL SAELNAQIIT ALYDYVPSEN DLQPLLAWLK VMEKAHINLV 120
RLQWDLGLGH LPRFFGTAVT CLLSPHSQVL TAATQSLKEI LKECVAPHMA DIGSVTSSAS 180
GPAQSVAKMF RAVEEGLTYK FHAAWSSVLQ LLCVFFEACG RQAHPVMRKC LQSLCDLRLS 240
PHFPHTAALD QAVGAAVTSM GPEVVLQAVP LEIDGSEETL DFPRSWLLPV IRDHVQETRL 300
GFFTTYFLPL ANTLKSKAMD LAQAGSTVES KIYDTLQWQM WTLLPGFCTR PTDVAISFKG 360
LARTLGMAIS ERPDLRVTVC QALRTLITKG CQAEADRAEV SRFAKNFLPI LFNLYGQPVA 420
AGDTPAPRRA VLETIRTYLT ITDTQLVNSL LEKASEKVLD PASSDFTRLS VLDLVVALAP 480
CADEAAISKL YSTIRPYLES KAHGVQKKAY RVLEEVCASP QGPGALFVQS HLEDLKKTLL 540
DSLRSTSSPA KRPRLKCLLH IVRKLSAEHK EFITALIPEV ILCTKEVSVG ARKNAFALLV 600
EMGHAFLRFG SNQEEALQCY LVLIYPGLVG AVTMVSCSIL ALTHLLFEFK GLMGTSTVEQ 660
LLENVCLLLA SRTRDVVKSA LGFIKVAVTV MDVAHLAKHV QLVMEAIGKL SDDMRRHFRM 720
KLRNLFTKFI RKFGFELVKR LLPEEYHRVL VNIRKAEARA KRHRALSQAA VEEEEEEEEE 780
EEPAQGKGDS IEEILADSED EEDNEEEERS RGKEQRKLAR QRSRAWLKEG GGDEPLNFLD 840
PKVAQRVLAT QPGPGRGRKK DHGFKVSADG RLIIREEADG NKMEEEEGAK GEDEEMADPM 900
EDVIIRNKKH QKLKHQKEAE EEELEIPPQY QAGGSGIHRP VAKKAMPGAE YKAKKAKGDV 960
KKKGRPDPYA YIPLNRSKLN RRKKMKLQGQ FKGLVKAARR GSQVGHKNRR KDRRP 1015 
Gene Ontology
  
Interpro
 IPR011989; ARM-like.
 IPR016024; ARM-type_fold.
 IPR012978; Uncharacterised_NUC173. 
Pfam
 PF08161; NUC173 
SMART
  
PROSITE
  
PRINTS