CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044906
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Tubulin delta chain 
Protein Synonyms/Alias
  
Gene Name
 TUBD1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
12VINQMLSKAAQSGQWubiquitination[1, 2]
30QHACFCQKQGSGNNWubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; GTP-binding; Microtubule; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 97 AA 
Protein Sequence
MEPKVINQML SKAAQSGQWK YGQHACFCQK QGSGNNWAYG YSVHGPRHEE SIMNIIRKEV 60
EKCDSFSGFF IIMSMAGGTG SGLGAFVTQN LEDQYSN 97 
Gene Ontology
 GO:0005874; C:microtubule; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0000242; C:pericentriolar material; IEA:InterPro.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0005200; F:structural constituent of cytoskeleton; IEA:InterPro.
 GO:0051297; P:centrosome organization; IEA:InterPro.
 GO:0051258; P:protein polymerization; IEA:InterPro. 
Interpro
 IPR002967; Delta_tubulin.
 IPR004057; Epsilon_tubulin.
 IPR000217; Tubulin.
 IPR017975; Tubulin_CS.
 IPR003008; Tubulin_FtsZ_GTPase. 
Pfam
 PF00091; Tubulin 
SMART
  
PROSITE
 PS00227; TUBULIN 
PRINTS
 PR01519; EPSLNTUBULIN.
 PR01161; TUBULIN.