CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006396
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Bifunctional epoxide hydrolase 2 
Protein Synonyms/Alias
 Cytosolic epoxide hydrolase 2; CEH; Epoxide hydratase; Soluble epoxide hydrolase; SEH; Lipid-phosphate phosphatase 
Gene Name
 EPHX2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
43LLNDAFQKGGPEGATacetylation[1]
43LLNDAFQKGGPEGATubiquitination[2, 3]
55GATTRLMKGEITLSQubiquitination[3]
79RKCSETAKVCLPKNFubiquitination[3]
84TAKVCLPKNFSIKEIubiquitination[3]
89LPKNFSIKEIFDKAIubiquitination[3]
94SIKEIFDKAISARKIacetylation[4]
94SIKEIFDKAISARKIubiquitination[3]
174KFLLDTLKASPSEVVubiquitination[3]
191DDIGANLKPARDLGMubiquitination[3]
245SHGYVTVKPRVRLHFubiquitination[3]
406QNLSRTFKSLFRASDubiquitination[3]
421ESVLSMHKVCEAGGLubiquitination[3]
455QFYVQQFKKSGFRGPubiquitination[3]
456FYVQQFKKSGFRGPLubiquitination[3]
474RNMERNWKWACKSLGubiquitination[3]
478RNWKWACKSLGRKILubiquitination[3]
483ACKSLGRKILIPALMubiquitination[3]
515EDWIPHLKRGHIEDCubiquitination[3]
530GHWTQMDKPTEVNQIubiquitination[3]
554RNPPVVSKM******ubiquitination[3]
Reference
 [1] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786
Functional Description
 Bifunctional enzyme. The C-terminal domain has epoxide hydrolase activity and acts on epoxides (alkene oxides, oxiranes) and arene oxides. Plays a role in xenobiotic metabolism by degrading potentially toxic epoxides. Also determines steady-state levels of physiological mediators. The N-terminal domain has lipid phosphatase activity, with the highest activity towards threo- 9,10-phosphonooxy-hydroxy-octadecanoic acid, followed by erythro- 9,10-phosphonooxy-hydroxy-octadecanoic acid, 12-phosphonooxy- octadec-9Z-enoic acid, 12-phosphonooxy-octadec-9E-enoic acid, and p-nitrophenyl phospate. 
Sequence Annotation
 REGION 1 224 Phosphatase.
 REGION 123 124 Phosphate binding.
 REGION 235 555 Epoxide hydrolase.
 MOTIF 553 555 Microbody targeting signal (Potential).
 ACT_SITE 335 335 Nucleophile.
 ACT_SITE 466 466 Proton donor.
 ACT_SITE 524 524 Proton acceptor.
 METAL 9 9 Magnesium.
 METAL 11 11 Magnesium.
 METAL 185 185 Magnesium.
 BINDING 383 383 Substrate.
 MOD_RES 43 43 N6-acetyllysine.
 LIPID 522 522 S-(15-deoxy-Delta12,14-prostaglandin J2-  
Keyword
 3D-structure; Acetylation; Alternative splicing; Aromatic hydrocarbons catabolism; Complete proteome; Cytoplasm; Detoxification; Direct protein sequencing; Hydrolase; Lipid metabolism; Lipoprotein; Magnesium; Metal-binding; Multifunctional enzyme; Peroxisome; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 555 AA 
Protein Sequence
MTLRAAVFDL DGVLALPAVF GVLGRTEEAL ALPRGLLNDA FQKGGPEGAT TRLMKGEITL 60
SQWIPLMEEN CRKCSETAKV CLPKNFSIKE IFDKAISARK INRPMLQAAL MLRKKGFTTA 120
ILTNTWLDDR AERDGLAQLM CELKMHFDFL IESCQVGMVK PEPQIYKFLL DTLKASPSEV 180
VFLDDIGANL KPARDLGMVT ILVQDTDTAL KELEKVTGIQ LLNTPAPLPT SCNPSDMSHG 240
YVTVKPRVRL HFVELGSGPA VCLCHGFPES WYSWRYQIPA LAQAGYRVLA MDMKGYGESS 300
APPEIEEYCM EVLCKEMVTF LDKLGLSQAV FIGHDWGGML VWYMALFYPE RVRAVASLNT 360
PFIPANPNMS PLESIKANPV FDYQLYFQEP GVAEAELEQN LSRTFKSLFR ASDESVLSMH 420
KVCEAGGLFV NSPEEPSLSR MVTEEEIQFY VQQFKKSGFR GPLNWYRNME RNWKWACKSL 480
GRKILIPALM VTAEKDFVLV PQMSQHMEDW IPHLKRGHIE DCGHWTQMDK PTEVNQILIK 540
WLDSDARNPP VVSKM 555 
Gene Ontology
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0005925; C:focal adhesion; IDA:HPA.
 GO:0005794; C:Golgi apparatus; IDA:HPA.
 GO:0005730; C:nucleolus; IDA:HPA.
 GO:0005777; C:peroxisome; IDA:UniProtKB.
 GO:0033885; F:10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity; IEA:EC.
 GO:0003869; F:4-nitrophenylphosphatase activity; IDA:UniProtKB.
 GO:0004301; F:epoxide hydrolase activity; IDA:UniProtKB.
 GO:0042577; F:lipid phosphatase activity; IDA:UniProtKB.
 GO:0000287; F:magnesium ion binding; IDA:UniProtKB.
 GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.
 GO:0015643; F:toxic substance binding; IDA:UniProtKB.
 GO:0006874; P:cellular calcium ion homeostasis; NAS:UniProtKB.
 GO:0042632; P:cholesterol homeostasis; IDA:UniProtKB.
 GO:0017144; P:drug metabolic process; NAS:UniProtKB.
 GO:0019373; P:epoxygenase P450 pathway; TAS:Reactome.
 GO:0006954; P:inflammatory response; NAS:UniProtKB.
 GO:0046839; P:phospholipid dephosphorylation; IDA:UniProtKB.
 GO:0010628; P:positive regulation of gene expression; IDA:UniProtKB.
 GO:0045909; P:positive regulation of vasodilation; NAS:UniProtKB.
 GO:0072593; P:reactive oxygen species metabolic process; NAS:UniProtKB.
 GO:0008217; P:regulation of blood pressure; NAS:UniProtKB.
 GO:0090181; P:regulation of cholesterol metabolic process; IMP:UniProtKB.
 GO:0009636; P:response to toxic substance; NAS:UniProtKB.
 GO:0046272; P:stilbene catabolic process; IDA:UniProtKB.
 GO:0006805; P:xenobiotic metabolic process; NAS:UniProtKB. 
Interpro
 IPR000073; AB_hydrolase_1.
 IPR000639; Epox_hydrolase-like.
 IPR023214; HAD-like_dom.
 IPR006402; HAD-SF_hydro_IA_v3.
 IPR011945; HAD-SF_ppase_IA/epoxid_hydro_N.
 IPR023198; PGP_dom2. 
Pfam
 PF00561; Abhydrolase_1
 PF13419; HAD_2 
SMART
  
PROSITE
  
PRINTS
 PR00111; ABHYDROLASE.
 PR00412; EPOXHYDRLASE.