CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039706
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Lon protease homolog, mitochondrial 
Protein Synonyms/Alias
 Lon protease-like protein; Mitochondrial ATP-dependent protease Lon; Serine protease 15 
Gene Name
 LONP1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
197KIKQTHRKYLLQEQLubiquitination[1]
383KIIQCLKKTKTENPLubiquitination[1]
552NLQDFVGKPVFTVERacetylation[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial promoters and RNA in a single- stranded, site-specific, and strand-specific manner. May regulate mitochondrial DNA replication and/or gene expression using site- specific, single-stranded DNA binding to target the degradation of regulatory proteins binding to adjacent sites in mitochondrial promoters (By similarity). 
Sequence Annotation
 DOMAIN 7 172 Lon (By similarity).
 NP_BIND 327 334 ATP (By similarity).
 ACT_SITE 659 659 By similarity.
 ACT_SITE 702 702 By similarity.  
Keyword
 ATP-binding; Complete proteome; DNA-binding; Hydrolase; Mitochondrion; Nucleotide-binding; Protease; Reference proteome; Serine protease; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 763 AA 
Protein Sequence
MQDLGDKLRM IVMGHRRVHI SRQLEVEPEE PEAENKHKPR RKSKRGKKEA EDELSARHPA 60
ELAMEPTPEL PAEVLMVEVE NVVHEDFQVT EEVKALTAEI VKTIRDIIAL NPLYRESVLQ 120
MMQAGQRVVD NPIYLSDMGA ALTGAESHEL QDVLEETNIP KRLYKALSLL KKEFELSKLQ 180
QRLGREVEEK IKQTHRKYLL QEQLKIIKKE LGLEKDDKDA IEEKFRERLK ELVVPKHVMD 240
VVDEELSKLG LLDNHSSEFN VTRNYLDWLT SIPWGKYSNE NLDLARAQAV LEEDHYGMED 300
VKKRILEFIA VSQLRGSTQG KILCFYGPPG VGKTSIARSI ARALNREYFR FSVGGMTDVA 360
EIKGHRRTYV GAMPGKIIQC LKKTKTENPL ILIDEVDKIG RGYQGDPSSA LLELLDPEQN 420
ANFLDHYLDV PVDLSKVLFI CTANVTDTIP EPLRDRMEMI NVSGYVAQEK LAIAERYLVP 480
QARALCGLDE SKAKLSSDVL TLLIKQYCRE SGVRNLQKQV EKVLRKSAYK IVSGEAESVE 540
VTPENLQDFV GKPVFTVERM YDVTPPGVVM GLAWTAMGGS TLFVETSLRR PQDKDAKGDK 600
DGSLEVTGQL GEVMKESARI AYTFARAFLM QHAPANDYLV TSHIHLHVPE GATPKDGPSA 660
GCTIVTALLS LAMGRPVRQN LAMTGEVSLT GKILPVGGIK EKTIAAKRAG VTCIVLPAEN 720
KKDFYDLAAF ITEGLEVHFV EHYREIFDIA FPDEQAEALA VER 763 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:HPA.
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0004176; F:ATP-dependent peptidase activity; IEA:HAMAP.
 GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IEA:Compara.
 GO:0043565; F:sequence-specific DNA binding; IEA:HAMAP.
 GO:0004252; F:serine-type endopeptidase activity; IEA:HAMAP.
 GO:0003697; F:single-stranded DNA binding; IEA:Compara.
 GO:0007568; P:aging; IEA:Compara.
 GO:0034599; P:cellular response to oxidative stress; IEA:HAMAP.
 GO:0051131; P:chaperone-mediated protein complex assembly; IEA:HAMAP.
 GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IEA:HAMAP.
 GO:0007005; P:mitochondrion organization; IEA:Compara.
 GO:0070407; P:oxidation-dependent protein catabolic process; IEA:HAMAP.
 GO:0090296; P:regulation of mitochondrial DNA replication; IEA:HAMAP.
 GO:0010044; P:response to aluminum ion; IEA:Compara.
 GO:0009725; P:response to hormone stimulus; IEA:Compara.
 GO:0001666; P:response to hypoxia; IEA:Compara. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR003959; ATPase_AAA_core.
 IPR004815; Lon_bac/euk-typ.
 IPR027065; Lon_Prtase.
 IPR027503; lonm_euk.
 IPR027417; P-loop_NTPase.
 IPR008269; Pept_S16_C.
 IPR003111; Pept_S16_N.
 IPR008268; Peptidase_S16_AS.
 IPR020568; Ribosomal_S5_D2-typ_fold.
 IPR014721; Ribosomal_S5_D2-typ_fold_subgr. 
Pfam
 PF00004; AAA
 PF02190; LON
 PF05362; Lon_C 
SMART
 SM00382; AAA 
PROSITE
 PS01046; LON_SER 
PRINTS