CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012693
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Frataxin, mitochondrial 
Protein Synonyms/Alias
 Friedreich ataxia protein; Fxn; Frataxin intermediate form; i-FXN; Frataxin(56-210); m56-FXN; Frataxin(78-210); d-FXN; m78-FXN; Frataxin mature form; Frataxin(81-210); m81-FXN 
Gene Name
 FXN 
Gene Synonyms/Alias
 FRDA; X25 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
197LTKALKTKLDLSSLAubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Promotes the biosynthesis of heme and assembly and repair of iron-sulfur clusters by delivering Fe(2+) to proteins involved in these pathways. May play a role in the protection against iron-catalyzed oxidative stress through its ability to catalyze the oxidation of Fe(2+) to Fe(3+); the oligomeric form but not the monomeric form has in vitro ferroxidase activity. May be able to store large amounts of iron in the form of a ferrihydrite mineral by oligomerization; however, the physiological relevance is unsure as reports are conflicting and the function has only been shown using heterologous overexpression systems. Modulates the RNA-binding activity of ACO1. 
Sequence Annotation
  
Keyword
 3D-structure; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Disease mutation; Heme biosynthesis; Ion transport; Iron; Iron storage; Iron transport; Metal-binding; Mitochondrion; Oxidoreductase; Polymorphism; Reference proteome; Transit peptide; Transport; Triplet repeat expansion. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 210 AA 
Protein Sequence
MWTLGRRAVA GLLASPSPAQ AQTLTRVPRP AELAPLCGRR GLRTDIDATC TPRRASSNQR 60
GLNQIWNVKK QSVYLMNLRK SGTLGHPGSL DETTYERLAE ETLDSLAEFF EDLADKPYTF 120
EDYDVSFGSG VLTVKLGGDL GTYVINKQTP NKQIWLSSPS SGPKRYDWTG KNWVYSHDGV 180
SLHELLAAEL TKALKTKLDL SSLAYSGKDA 210 
Gene Ontology
 GO:0005829; C:cytosol; IDA:BHF-UCL.
 GO:0005759; C:mitochondrial matrix; ISS:BHF-UCL.
 GO:0051537; F:2 iron, 2 sulfur cluster binding; IDA:BHF-UCL.
 GO:0008199; F:ferric iron binding; IDA:BHF-UCL.
 GO:0008198; F:ferrous iron binding; IDA:BHF-UCL.
 GO:0004322; F:ferroxidase activity; IDA:UniProtKB.
 GO:0034986; F:iron chaperone activity; IDA:BHF-UCL.
 GO:0007628; P:adult walking behavior; IEA:Compara.
 GO:0009060; P:aerobic respiration; IEA:Compara.
 GO:0006879; P:cellular iron ion homeostasis; IMP:BHF-UCL.
 GO:0070301; P:cellular response to hydrogen peroxide; IDA:UniProtKB.
 GO:0009792; P:embryo development ending in birth or egg hatching; IEA:Compara.
 GO:0006783; P:heme biosynthetic process; NAS:BHF-UCL.
 GO:0006811; P:ion transport; IEA:UniProtKB-KW.
 GO:0018283; P:iron incorporation into metallo-sulfur cluster; IDA:BHF-UCL.
 GO:0007005; P:mitochondrion organization; IEA:Compara.
 GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.
 GO:0040015; P:negative regulation of multicellular organism growth; IEA:Compara.
 GO:0046621; P:negative regulation of organ growth; IEA:Compara.
 GO:0090201; P:negative regulation of release of cytochrome c from mitochondria; IMP:UniProtKB.
 GO:0006119; P:oxidative phosphorylation; IEA:Compara.
 GO:0045773; P:positive regulation of axon extension; IEA:Compara.
 GO:0030307; P:positive regulation of cell growth; IMP:BHF-UCL.
 GO:0008284; P:positive regulation of cell proliferation; IMP:BHF-UCL.
 GO:0051349; P:positive regulation of lyase activity; IDA:UniProtKB.
 GO:0048554; P:positive regulation of metalloenzyme activity; IMP:BHF-UCL.
 GO:0051353; P:positive regulation of oxidoreductase activity; IMP:BHF-UCL.
 GO:0051347; P:positive regulation of transferase activity; IMP:BHF-UCL.
 GO:0019230; P:proprioception; IEA:Compara.
 GO:0016540; P:protein autoprocessing; IDA:BHF-UCL.
 GO:0010722; P:regulation of ferrochelatase activity; IDA:BHF-UCL.
 GO:0042493; P:response to drug; IEA:Compara.
 GO:0010039; P:response to iron ion; IMP:BHF-UCL.
 GO:0014070; P:response to organic cyclic compound; IEA:Compara.
 GO:0044281; P:small molecule metabolic process; TAS:Reactome. 
Interpro
 IPR017789; Frataxin.
 IPR002908; Frataxin/CyaY.
 IPR020895; Frataxin_CS. 
Pfam
 PF01491; Frataxin_Cyay 
SMART
  
PROSITE
 PS01344; FRATAXIN_1
 PS50810; FRATAXIN_2 
PRINTS
 PR00904; FRATAXIN.